STRINGSTRING
Ttc38 Ttc38 Trmu Trmu Fam118a Fam118a Ttc36 Ttc36 Zcchc17 Zcchc17 Hdhd2 Hdhd2 Abhd14b Abhd14b Clip3 Clip3 Lrit1 Lrit1 Trappc13 Trappc13 Mansc4 Mansc4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Ttc38Tetratricopeptide repeat protein 38. (465 aa)    
Predicted Functional Partners:
Trmu
Mitochondrial tRNA-specific 2-thiouridylase 1; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of mitochondrial tRNA(Lys), tRNA(Glu) and tRNA(Gln). Required for the formation of 5-taurinomethyl-2-thiouridine (tm5s2U) of mitochondrial tRNA(Lys), tRNA(Glu), and tRNA(Gln) at the wobble position. ATP is required to activate the C2 atom of the wobble base.
 
 
  
 0.722
Fam118a
Protein FAM118A; Belongs to the FAM118 family.
      
 0.657
Ttc36
Tetratricopeptide repeat protein 36; Belongs to the TTC36 family.
   
  
 0.543
Zcchc17
Nucleolar protein of 40 kDa.
      
 0.538
Hdhd2
Haloacid dehalogenase-like hydrolase domain-containing protein 2; Belongs to the HAD-like hydrolase superfamily.
      
 0.502
Abhd14b
Protein ABHD14B; Has hydrolase activity towards p-nitrophenyl butyrate (in vitro). May activate transcription (By similarity).
   
  
 0.480
Clip3
CAP-Gly domain-containing linker protein 3; Functions as a cytoplasmic linker protein. Involved in TGN- endosome dynamics. May modulate the cellular compartmentalization of AKT kinase family and promote its cell membrane localization, thereby playing a role in glucose transport in adipocytes (By similarity).
      
 0.473
Lrit1
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1; Possible role in phototransduction.
   
  
 0.455
Trappc13
Trafficking protein particle complex subunit 13; Belongs to the TRAPPC13 family.
      
 0.447
Mansc4
MANSC domain-containing protein 4.
      
 0.447
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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