STRINGSTRING
Xcel_0890 Xcel_0890 Xcel_0889 Xcel_0889 Xcel_0891 Xcel_0891 Xcel_3016 Xcel_3016 Xcel_0892 Xcel_0892 Xcel_2617 Xcel_2617 Xcel_0894 Xcel_0894 Xcel_0893 Xcel_0893 Xcel_0693 Xcel_0693 Xcel_2405 Xcel_2405 Xcel_0972 Xcel_0972
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Xcel_0890TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: bcj:BCAL0851 putative iron-sulphur cluster containing protein. (510 aa)    
Predicted Functional Partners:
Xcel_0889
PFAM: protein of unknown function DUF162; KEGG: rme:Rmet_2448 protein of unknown function DUF162.
 
 0.999
Xcel_0891
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: acr:Acry_0140 hypothetical protein.
 
 0.998
Xcel_3016
PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: noc:Noc_0464 hypothetical protein.
 
 
 0.863
Xcel_0892
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rde:RD1_0666 oxidoreductase, putative.
       0.773
Xcel_2617
PFAM: Aldehyde Dehydrogenase; Proline dehydrogenase; KEGG: dal:Dalk_3943 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.595
Xcel_0894
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: ret:RHE_CH01730 putative oxidoreductase protein.
  
    0.586
Xcel_0893
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr3057 3-ketoacyl-(acyl-carrier-protein) reductase.
   
   0.533
Xcel_0693
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.526
Xcel_2405
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: apa:APP7_1068 alcohol dehydrogenase / acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.471
Xcel_0972
Citrate synthase I; KEGG: scl:sce8281 hypothetical protein; TIGRFAM: citrate synthase I; PFAM: Citrate synthase.
   
    0.456
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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