STRINGSTRING
EHY30663.1 EHY30663.1 rsmA rsmA pdxJ pdxJ surA surA lptD lptD serC serC EHY31978.1 EHY31978.1 EHY31042.1 EHY31042.1 EHY30688.1 EHY30688.1 EHY30670.1 EHY30670.1 EHY30689.1 EHY30689.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
EHY30663.1KEGG: bcj:BCAL0896 1.9e-72 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097; Psort location: Cytoplasmic, score: 9.97; Belongs to the PdxA family. (311 aa)    
Predicted Functional Partners:
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
  
 0.896
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
 
  
 0.811
surA
SurA protein; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.
  
  
 0.676
lptD
Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
    0.645
serC
Putative phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
     
 0.618
EHY31978.1
KEGG: neu:NE2370 1.1e-99 thrC; threonine synthase K01733; Psort location: Cytoplasmic, score: 9.97.
    
  0.547
EHY31042.1
Putative threonine synthase; KEGG: asu:Asuc_1297 1.8e-131 pyridoxal-5'-phosphate-dependent protein beta subunit; K01733 threonine synthase; Psort location: Cytoplasmic, score: 9.97.
    
  0.547
EHY30688.1
Nucleotidyl transferase; KEGG: rso:RSc0511 1.8e-44 putative mannose-1-phosphate guanyltransferase-related protein K00992; Psort location: Cytoplasmic, score: 9.97.
       0.467
EHY30670.1
Phosphotransferase enzyme family protein; KEGG: pen:PSEEN0432 1.1e-44 phosphotransferase K07102; Psort location: Cytoplasmic, score: 8.96.
       0.462
EHY30689.1
Hypothetical protein; KEGG: pen:PSEEN0432 2.0e-29 phosphotransferase K07102.
       0.448
Your Current Organism:
Sutterella parvirubra
NCBI taxonomy Id: 762967
Other names: S. parvirubra YIT 11816, Sutterella parvirubra YIT 11816, Sutterella parvirubra str. YIT 11816, Sutterella parvirubra strain YIT 11816
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