STRINGSTRING
Tint_1259 Tint_1259 Tint_1258 Tint_1258 Tint_2008 Tint_2008 Tint_0247 Tint_0247 Tint_1261 Tint_1261 thiC thiC Tint_1262 Tint_1262 thiG thiG Tint_1264 Tint_1264
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Tint_1259PFAM: Pirin domain protein; KEGG: bcj:BCAL1030 pirin-like protein; Belongs to the pirin family. (288 aa)    
Predicted Functional Partners:
Tint_1258
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet0008 LysR family transcriptional regulator.
 
 
   0.726
Tint_2008
Glutathione-dependent formaldehyde-activating GFA; KEGG: cvi:CV_1054 hypothetical protein; manually curated; PFAM: glutathione-dependent formaldehyde-activating GFA.
 
      0.674
Tint_0247
PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: xcb:XC_3737 hypothetical protein.
 
  
 0.669
Tint_1261
Glycine oxidase ThiO; KEGG: pol:Bpro_0038 FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase.
  
    0.446
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
       0.444
Tint_1262
KEGG: pna:Pnap_0021 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein.
       0.444
thiG
Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
       0.444
Tint_1264
PFAM: protein of unknown function DUF1211; KEGG: dar:Daro_3436 hypothetical protein.
       0.444
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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