STRINGSTRING
Tter_1731 Tter_1731 Tter_1730 Tter_1730 Tter_2728 Tter_2728 lgt lgt Tter_2012 Tter_2012 Tter_1733 Tter_1733 Tter_1734 Tter_1734 valS valS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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Experiments
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[Homology]
Score
Tter_1731PFAM: protein of unknown function DUF1470; KEGG: bcj:BCAL1138 hypothetical protein. (185 aa)    
Predicted Functional Partners:
Tter_1730
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: sat:SYN_01290 copper-exporting ATPase.
  
    0.775
Tter_2728
KEGG: afw:Anae109_3510 hypothetical protein.
  
     0.542
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.533
Tter_2012
PFAM: ferric iron reductase; KEGG: pmy:Pmen_2861 ferric iron reductase.
  
     0.529
Tter_1733
PFAM: DSBA oxidoreductase; KEGG: mxa:MXAN_3206 DsbA-like thioredoxin domain protein.
       0.526
Tter_1734
PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; KEGG: aba:Acid345_0799 vitamin K epoxide reductase.
       0.519
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
  
     0.412
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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