STRINGSTRING
ADG18859.1 ADG18859.1 ADG18858.1 ADG18858.1 ADG18861.1 ADG18861.1 ADG18860.1 ADG18860.1 ADG18862.1 ADG18862.1 ADG18857.1 ADG18857.1 icmF icmF ADG14413.1 ADG14413.1 nuoI nuoI ADG19137.1 ADG19137.1 nuoD nuoD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG18859.1KEGG: bcj:BCAL1406 hypothetical protein. (304 aa)    
Predicted Functional Partners:
ADG18858.1
PFAM: protein of unknown function DUF1275; KEGG: bac:BamMC406_5590 hypothetical protein.
       0.780
ADG18861.1
PFAM: Amidohydrolase 3; KEGG: bam:Bamb_5808 amidohydrolase 3.
  
    0.674
ADG18860.1
PFAM: DoxX family protein; KEGG: bcm:Bcenmc03_1375 DoxX family protein.
       0.672
ADG18862.1
XapX domain protein; KEGG: bac:BamMC406_5593 hypothetical protein; TIGRFAM: XapX domain protein; PFAM: protein of unknown function DUF1427.
       0.595
ADG18857.1
KEGG: bam:Bamb_1277 hypothetical protein.
       0.566
icmF
methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
  
 0.516
ADG14413.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bpy:Bphyt_0581 4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
  
 0.446
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.446
ADG19137.1
KEGG: bpy:Bphyt_6856 succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit.
   
  
 0.440
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
  
 0.433
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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