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Ddes_0210 Ddes_0210 Ddes_0212 Ddes_0212 Ddes_1875 Ddes_1875 Ddes_1157 Ddes_1157 Ddes_0211 Ddes_0211 Ddes_2284 Ddes_2284 guaA guaA Ddes_2061 Ddes_2061 Ddes_0640 Ddes_0640 Ddes_0191 Ddes_0191 Ddes_1601 Ddes_1601
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Ddes_0210Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcj:BCAL1417 LysR family regulatory protein; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
Ddes_0212
PFAM: LrgB family protein; KEGG: gbm:Gbem_2907 LrgB family protein.
 
   
 0.604
Ddes_1875
PFAM: Hpt domain protein; KEGG: pmy:Pmen_0835 multi-sensor hybrid histidine kinase.
   
  
 0.579
Ddes_1157
PFAM: glutamate synthase alpha subunit domain protein; KEGG: ppd:Ppro_2159 glutamate synthase alpha subunit.
  
 
 0.563
Ddes_0211
PFAM: LrgA family protein; KEGG: dsy:DSY3772 hypothetical protein.
     
 0.554
Ddes_2284
KEGG: cdf:CD0522 putative signaling protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAC repeat-containing protein.
  
  
 0.504
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.489
Ddes_2061
PFAM: Acyl transferase; KEGG: sco:SCO5892 polyketide synthase.
  
  
 0.468
Ddes_0640
PFAM: helix-turn-helix domain protein; KEGG: hau:Haur_2753 XRE family transcriptional regulator.
  
  
 0.455
Ddes_0191
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: glo:Glov_1726 multi-sensor hybrid histidine kinase.
   
  
 0.442
Ddes_1601
KEGG: mgm:Mmc1_2222 PAS/PAC sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: GAF domain protein.
   
  
 0.442
Your Current Organism:
Desulfovibrio desulfuricans ATCC 27774
NCBI taxonomy Id: 525146
Other names: D. desulfuricans ATCC 27774, Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
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