STRINGSTRING
Snas_4941 Snas_4941 Snas_4940 Snas_4940 Snas_2764 Snas_2764 Snas_4942 Snas_4942 Snas_3234 Snas_3234 Snas_1525 Snas_1525
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_4941Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcj:BCAL1732 MarR family regulatory protein. (173 aa)    
Predicted Functional Partners:
Snas_4940
PFAM: protein of unknown function DUF6 transmembrane; KEGG: rle:RL0285 putative transmembrane transporter protein.
 
   
 0.875
Snas_2764
PFAM: protein of unknown function DUF6 transmembrane; KEGG: reh:H16_A0077 predicted PecM protein.
 
   
 0.722
Snas_4942
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: scl:sce4618 peroxiredoxin.
       0.498
Snas_3234
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mno:Mnod_5248 transcriptional regulator, MarR family.
  
     0.491
Snas_1525
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: acp:A2cp1_4259 transcriptional regulator, MarR family.
  
     0.466
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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