STRINGSTRING
EEW25072.1 EEW25072.1 EEW25073.1 EEW25073.1 EEW25112.1 EEW25112.1 rplF rplF EEW26152.1 EEW26152.1 EEW25836.1 EEW25836.1 EEW25902.1 EEW25902.1 EEW25739.1 EEW25739.1 EEW24883.1 EEW24883.1 EEW23998.1 EEW23998.1 EEW25074.1 EEW25074.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW25072.1PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bcj:BCAL2492 putative transport permease protein. (206 aa)    
Predicted Functional Partners:
EEW25073.1
KEGG: mag:amb1922 hypothetical protein.
       0.773
EEW25112.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.728
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.701
EEW26152.1
PFAM: AMP-dependent synthetase and ligase; KEGG: dsh:Dshi_2999 malonyl-CoA synthase.
    
  0.600
EEW25836.1
PFAM: KR domain protein; short-chain dehydrogenase/reductase SDR; Beta-ketoacyl synthase; Alcohol dehydrogenase GroES domain protein; aminotransferase class-III; Acyl transferase; Alcohol dehydrogenase zinc-binding domain protein; phosphopantetheine-binding; NAD-dependent epimerase/dehydratase; KEGG: hau:Haur_3959 beta-ketoacyl synthase.
    
  0.600
EEW25902.1
PFAM: AMP-dependent synthetase and ligase; KEGG: dsh:Dshi_0853 acyl-CoA synthetase.
    
  0.600
EEW25739.1
PFAM: cytochrome P450; KEGG: jan:Jann_1726 cytochrome P450.
    
  0.586
EEW24883.1
PFAM: cytochrome P450; KEGG: pde:Pden_2272 cytochrome P450.
    
  0.586
EEW23998.1
PFAM: cytochrome P450; KEGG: sil:SPO1898 cytochrome P450 family protein.
    
  0.586
EEW25074.1
PFAM: major facilitator superfamily MFS_1; KEGG: neu:NE2492 general substrate transporters.
 
     0.565
Your Current Organism:
Rhodobacter sp. SW2
NCBI taxonomy Id: 371731
Other names: R. sp. SW2, Rhodobacter sp. SW 2
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