STRINGSTRING
Tint_2924 Tint_2924 Tint_2923 Tint_2923 Tint_2922 Tint_2922 Tint_2925 Tint_2925 Tint_2927 Tint_2927 Tint_2926 Tint_2926 icmF icmF polA polA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_2924TIGRFAM: phage/plasmid-related protein TIGR03299; KEGG: bcj:BCAL2507 hypothetical protein. (311 aa)    
Predicted Functional Partners:
Tint_2923
Phage-type endonuclease; KEGG: dar:Daro_1657 hypothetical protein; TIGRFAM: phage-type endonuclease; PFAM: YqaJ viral recombinase family.
 
     0.909
Tint_2922
KEGG: har:HEAR0513 putative hydrolase or metal-binding protein.
 
     0.908
Tint_2925
KEGG: ppg:PputGB1_4741 hypothetical protein.
 
     0.893
Tint_2927
KEGG: pmy:Pmen_1160 hypothetical protein.
 
     0.841
Tint_2926
Hypothetical protein.
       0.520
icmF
methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
      
 0.426
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.423
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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