Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACK52838.1 | ACR02476.1 | Tmz1t_0036 | Tmz1t_3888 | KEGG: rpi:Rpic_4338 transcriptional regulator, CopG family. | KEGG: mgm:Mmc1_3147 protein of unknown function DUF132. | 0.427 |
ACK52838.1 | ACR02477.1 | Tmz1t_0036 | Tmz1t_3889 | KEGG: rpi:Rpic_4338 transcriptional regulator, CopG family. | KEGG: bcj:BCAL2555 hypothetical protein. | 0.450 |
ACK53827.1 | ACR02477.1 | Tmz1t_1065 | Tmz1t_3889 | PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: aca:ACP_3427 conserved hypothetical protein TIGR00305. | KEGG: bcj:BCAL2555 hypothetical protein. | 0.477 |
ACR01346.1 | ACR02477.1 | Tmz1t_2746 | Tmz1t_3889 | TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: afr:AFE_0890 stability protein StbE, putative. | KEGG: bcj:BCAL2555 hypothetical protein. | 0.425 |
ACR02476.1 | ACK52838.1 | Tmz1t_3888 | Tmz1t_0036 | KEGG: mgm:Mmc1_3147 protein of unknown function DUF132. | KEGG: rpi:Rpic_4338 transcriptional regulator, CopG family. | 0.427 |
ACR02476.1 | ACR02477.1 | Tmz1t_3888 | Tmz1t_3889 | KEGG: mgm:Mmc1_3147 protein of unknown function DUF132. | KEGG: bcj:BCAL2555 hypothetical protein. | 0.949 |
ACR02477.1 | ACK52838.1 | Tmz1t_3889 | Tmz1t_0036 | KEGG: bcj:BCAL2555 hypothetical protein. | KEGG: rpi:Rpic_4338 transcriptional regulator, CopG family. | 0.450 |
ACR02477.1 | ACK53827.1 | Tmz1t_3889 | Tmz1t_1065 | KEGG: bcj:BCAL2555 hypothetical protein. | PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: aca:ACP_3427 conserved hypothetical protein TIGR00305. | 0.477 |
ACR02477.1 | ACR01346.1 | Tmz1t_3889 | Tmz1t_2746 | KEGG: bcj:BCAL2555 hypothetical protein. | TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: afr:AFE_0890 stability protein StbE, putative. | 0.425 |
ACR02477.1 | ACR02476.1 | Tmz1t_3889 | Tmz1t_3888 | KEGG: bcj:BCAL2555 hypothetical protein. | KEGG: mgm:Mmc1_3147 protein of unknown function DUF132. | 0.949 |