STRINGSTRING
Namu_4943 Namu_4943 Namu_4944 Namu_4944 Namu_4945 Namu_4945 Namu_4946 Namu_4946
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Namu_4943PFAM: transposase mutator type; KEGG: bcj:BCAL3250 putative transposase. (462 aa)    
Predicted Functional Partners:
Namu_4944
Hypothetical protein.
       0.689
Namu_4945
KEGG: acp:A2cp1_2919 general secretion pathway protein-related protein.
  
    0.424
Namu_4946
PFAM: Integrase catalytic region; Transposase-like Mu; KEGG: gur:Gura_1105 integrase catalytic subunit.
       0.424
Your Current Organism:
Nakamurella multipartita
NCBI taxonomy Id: 479431
Other names: N. multipartita DSM 44233, Nakamurella multipartita DSM 44233, Nakamurella multipartita str. DSM 44233, Nakamurella multipartita strain DSM 44233
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