STRINGSTRING
Tpau_2700 Tpau_2700 Tpau_2698 Tpau_2698 Tpau_2699 Tpau_2699 Tpau_2701 Tpau_2701 Tpau_2702 Tpau_2702 Tpau_2704 Tpau_2704 Tpau_2697 Tpau_2697 Tpau_2703 Tpau_2703 Tpau_1746 Tpau_1746
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Tpau_2700PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bcj:BCAM0071 putative mandelate racemase/muconate lactonizing enzyme. (396 aa)    
Predicted Functional Partners:
Tpau_2698
PFAM: GH3 auxin-responsive promoter; KEGG: bcj:BCAM0069 hypothetical protein.
 
     0.857
Tpau_2699
KEGG: bcj:BCAM0070 putative hydrolase.
 
     0.830
Tpau_2701
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase.
     
 0.776
Tpau_2702
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mes:Meso_0482 fumarate reductase/succinate dehydrogenase flavoprotein-like.
       0.668
Tpau_2704
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ace:Acel_0713 5-carboxymethyl-2- hydroxymuconate delta-isomerase.
  
  
 0.573
Tpau_2697
PFAM: Integrase catalytic region; KEGG: cms:CMS_2918 putative insertion element ISCmi3 transposase.
       0.545
Tpau_2703
PFAM: major facilitator superfamily MFS_1; KEGG: rop:ROP_05990 putative drug resistance efflux protein.
       0.540
Tpau_1746
PFAM: Amidohydrolase 3; amidohydrolase; KEGG: rer:RER_47290 hypothetical protein.
 
     0.446
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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