STRINGSTRING
Amir_3497 Amir_3497 Amir_3498 Amir_3498 Amir_2370 Amir_2370 Amir_4576 Amir_4576 Amir_3208 Amir_3208 Amir_5295 Amir_5295
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amir_3497Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bcj:BCAM0093 MerR family regulatory protein. (227 aa)    
Predicted Functional Partners:
Amir_3498
PFAM: Erythromycin esterase; KEGG: swi:Swit_1817 erythromycin esterase.
 
     0.910
Amir_2370
KEGG: dal:Dalk_3918 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold- 4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain containing protein.
   
 
 0.442
Amir_4576
Hypothetical protein; KEGG: sus:Acid_3202 alpha/beta hydrolase fold.
  
    0.425
Amir_3208
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: psa:PST_0620 hypothetical protein.
  
     0.408
Amir_5295
PFAM: regulatory protein TetR; KEGG: mno:Mnod_1181 transcriptional regulator, TetR family.
  
     0.400
Your Current Organism:
Actinosynnema mirum
NCBI taxonomy Id: 446462
Other names: A. mirum DSM 43827, Actinosynnema mirum DSM 43827, Actinosynnema mirum str. DSM 43827, Actinosynnema mirum strain DSM 43827
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