STRINGSTRING
ADN56681.1 ADN56681.1 ADN57064.1 ADN57064.1 ADN60487.1 ADN60487.1 ADN57504.1 ADN57504.1 ADN56073.1 ADN56073.1 ADN58280.1 ADN58280.1 ADN56080.1 ADN56080.1 ADN57176.1 ADN57176.1 lptE lptE ADN58647.1 ADN58647.1 ADN58997.1 ADN58997.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN56681.1PFAM: porin Gram-negative type; KEGG: bcj:BCAM0407 putative porin. (393 aa)    
Predicted Functional Partners:
ADN57064.1
KEGG: bxe:Bxe_A1444 putative exported lipoprotein.
  
     0.745
ADN60487.1
KEGG: bxe:Bxe_B2841 putative transmembrane protein.
  
     0.745
ADN57504.1
KEGG: bpy:Bphyt_1819 putative inner membrane protein.
  
     0.742
ADN56073.1
KEGG: bpy:Bphyt_0307 thioredoxin domain.
  
 
   0.741
ADN58280.1
KEGG: bxe:Bxe_A3222 putative lipoprotein.
  
     0.732
ADN56080.1
KEGG: bxe:Bxe_A4411 hypothetical protein.
  
     0.725
ADN57176.1
KEGG: bxe:Bxe_A1586 putative lipoprotein.
  
     0.720
lptE
Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.
  
   
 0.718
ADN58647.1
PFAM: Lytic transglycosylase catalytic; KEGG: bxe:Bxe_A0889 transglycosylase SLT domain-containing lipoprotein.
  
     0.708
ADN58997.1
PFAM: protein of unknown function DUF721; KEGG: bxe:Bxe_A0494 hypothetical protein.
  
     0.701
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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