STRINGSTRING
ERJ69561.1 ERJ69561.1 rpoA rpoA ERJ69559.1 ERJ69559.1 ERJ69560.1 ERJ69560.1 rimM rimM murA murA ERJ72665.1 ERJ72665.1 pgi pgi ERJ71750.1 ERJ71750.1 ERJ69564.1 ERJ69564.1 ERJ73311.1 ERJ73311.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ69561.1KEGG: bcj:BCAM0483 0.00079 ADA-like AraC family regulatory protein; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II; Psort location: Cytoplasmic, score: 8.96. (308 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.781
ERJ69559.1
Dihydroorotase; KEGG: pgn:PGN_1027 1.1e-156 dihydroorotase; K01465 dihydroorotase; Psort location: Cytoplasmic, score: 9.97.
       0.774
ERJ69560.1
KEGG: sds:SDEG_1426 6.2e-06 CAAX amino terminal protease K07052; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
rimM
16S rRNA processing protein RimM family protein; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.
       0.646
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.646
ERJ72665.1
Putative arginine decarboxylase, pyruvoyl-dependent; KEGG: pgn:PGN_1038 8.5e-84 hypothetical protein; K02626 arginine decarboxylase; Psort location: Cytoplasmic, score: 8.96.
  
     0.631
pgi
KEGG: pgi:PG1368 2.4e-166 pgi; glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.97; Belongs to the GPI family.
   
   0.622
ERJ71750.1
Putative outer membrane protein 41; Psort location: OuterMembrane, score: 9.93.
  
     0.595
ERJ69564.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.593
ERJ73311.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.574
Your Current Organism:
Porphyromonas sp. W7784
NCBI taxonomy Id: 1227272
Other names: P. sp. oral taxon 278 str. W7784, Porphyromonas sp. oral taxon 278 str. W7784
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