STRINGSTRING
Gbro_0187 Gbro_0187 Gbro_0188 Gbro_0188 Gbro_0186 Gbro_0186 Gbro_4340 Gbro_4340 Gbro_4336 Gbro_4336 Gbro_0043 Gbro_0043 Gbro_0776 Gbro_0776 Gbro_0594 Gbro_0594 Gbro_3853 Gbro_3853 Gbro_0870 Gbro_0870 Gbro_4339 Gbro_4339
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gbro_0187PFAM: regulatory protein TetR; KEGG: bcj:BCAM0700 TetR family regulatory protein. (205 aa)    
Predicted Functional Partners:
Gbro_0188
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mxa:MXAN_3480 Rieske family iron-sulfur cluster-binding protein.
  
    0.836
Gbro_0186
PFAM: secretory lipase; KEGG: secretory lipase; K01175.
 
     0.672
Gbro_4340
PFAM: Uncharacterised conserved protein UCP07580; KEGG: rpi:Rpic_1296 FF domain protein.
 
     0.588
Gbro_4336
TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; KEGG: maq:Maqu_0168 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
  
     0.578
Gbro_0043
PFAM: Protein of unknown function DUF2236; KEGG: bbt:BBta_3751 hypothetical protein.
  
     0.541
Gbro_0776
PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pap:PSPA7_1798 hypothetical protein.
  
     0.495
Gbro_0594
PFAM: dienelactone hydrolase; alpha/beta hydrolase fold; KEGG: acb:A1S_1757 alpha/beta hydrolase.
  
     0.483
Gbro_3853
PFAM: protein of unknown function UPF0089; KEGG: vap:Vapar_4801 acyltransferase, WS/DGAT/MGAT.
  
     0.466
Gbro_0870
KEGG: bur:Bcep18194_B2025 hypothetical protein.
  
     0.426
Gbro_4339
PFAM: short-chain dehydrogenase/reductase SDR; alpha/beta hydrolase fold; KR domain protein; KEGG: pap:PSPA7_1796 short chain dehydrogenase.
 
     0.419
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.