STRINGSTRING
ACS21075.1 ACS21075.1 ACS21076.1 ACS21076.1 ACS19009.1 ACS19009.1 ACS19942.1 ACS19942.1 ACS19407.1 ACS19407.1 ACS19941.1 ACS19941.1 ACS21912.1 ACS21912.1 ACS19938.1 ACS19938.1 ACS19939.1 ACS19939.1 ACS21074.1 ACS21074.1 ACS21012.1 ACS21012.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ACS21075.1TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: bcj:BCAM1300 protocatechuate 3,4-dioxygenase beta chain. (238 aa)    
Predicted Functional Partners:
ACS21076.1
KEGG: bph:Bphy_3890 protocatechuate 3,4-dioxygenase, alpha subunit; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase.
 
0.998
ACS19009.1
KEGG: dac:Daci_4358 4-hydroxybenzoate 3-monooxygenase; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding.
 
  
 0.982
ACS19942.1
TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: pol:Bpro_1855 3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.982
ACS19407.1
PFAM: intradiol ring-cleavage dioxygenase; KEGG: pol:Bpro_3458 intradiol ring-cleavage dioxygenase.
  
  
 
0.926
ACS19941.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_1856 4-carboxymuconolactone decarboxylase.
 
  
 0.798
ACS21912.1
Hydroxyquinol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bpy:Bphyt_4110 hydroxyquinol 1,2-dioxygenase.
  
   
 0.709
ACS19938.1
4-hydroxyphenylpyruvate dioxygenase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pst:PSPTO_2346 4-hydroxyphenylpyruvate dioxygenase, putative.
 
   
 0.688
ACS19939.1
PFAM: alpha/beta hydrolase fold; KEGG: pna:Pnap_2121 alpha/beta hydrolase fold.
 
   
 0.679
ACS21074.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpi:Rpic_1317 transcriptional regulator, LysR family.
 
   
 0.606
ACS21012.1
PFAM: amidohydrolase 2; KEGG: dac:Daci_4537 amidohydrolase 2.
  
     0.550
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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