STRINGSTRING
Tpau_0456 Tpau_0456 Tpau_0457 Tpau_0457 Tpau_1514 Tpau_1514 Tpau_2703 Tpau_2703 Tpau_3066 Tpau_3066 Tpau_0633 Tpau_0633 Tpau_1705 Tpau_1705 Tpau_1704 Tpau_1704 Tpau_3619 Tpau_3619 Tpau_0141 Tpau_0141 Tpau_2454 Tpau_2454
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0456PFAM: major facilitator superfamily MFS_1; KEGG: bcj:BCAM1381 major facilitator superfamily protein. (409 aa)    
Predicted Functional Partners:
Tpau_0457
PFAM: amidohydrolase 2; KEGG: cgb:cg0540 hypothetical protein.
       0.773
Tpau_1514
PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_05434 major facilitator family transporter.
  
     0.672
Tpau_2703
PFAM: major facilitator superfamily MFS_1; KEGG: rop:ROP_05990 putative drug resistance efflux protein.
  
     0.668
Tpau_3066
PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO2502 transport protein.
  
     0.663
Tpau_0633
PFAM: major facilitator superfamily MFS_1; KEGG: rer:RER_55160 drug resistance efflux protein.
  
     0.642
Tpau_1705
PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro06618 major facilitator superfamily multidrug transporter.
  
     0.639
Tpau_1704
KEGG: rop:ROP_66540 putative MFS transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1.
  
     0.635
Tpau_3619
KEGG: rop:ROP_16300 drug resistance efflux protein; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1.
  
     0.598
Tpau_0141
PFAM: major facilitator superfamily MFS_1; KEGG: sav:SAVP032 QacA protein.
  
     0.522
Tpau_2454
PFAM: major facilitator superfamily MFS_1; KEGG: mab:MAB_2958 putative transmembrane-transport protein.
  
     0.507
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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