STRINGSTRING
AEF22665.1 AEF22665.1 AEF20017.1 AEF20017.1 AEF22666.1 AEF22666.1 AEF23483.1 AEF23483.1 AEF21456.1 AEF21456.1 AEF21564.1 AEF21564.1 deaD deaD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF22665.1PFAM: Protein of unknown function DUF1486; KEGG: bcj:BCAM1782 hypothetical protein. (132 aa)    
Predicted Functional Partners:
AEF20017.1
KEGG: pap:PSPA7_4379 ectoine utilization protein EutE; TIGRFAM: Ectoine utilization protein EutE; PFAM: Succinylglutamate desuccinylase/aspartoacylase.
  
     0.496
AEF22666.1
KEGG: pmy:Pmen_2143 spermidine synthase-like protein.
       0.440
AEF23483.1
PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: pde:Pden_2817 glutathione-dependent formaldehyde-activating, GFA.
  
     0.430
AEF21456.1
Virulence factor family protein; PFAM: Bacterial virulence; KEGG: pau:PA14_52370 hypothetical protein.
  
     0.428
AEF21564.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: bpt:Bpet3144 hypothetical protein.
  
     0.416
deaD
DEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.
       0.406
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.