STRINGSTRING
Tint_0973 Tint_0973 Tint_0974 Tint_0974 Tint_0976 Tint_0976 Tint_0975 Tint_0975 Tint_0977 Tint_0977 Tint_0978 Tint_0978 Tint_0979 Tint_0979 Tint_0972 Tint_0972 Tint_0980 Tint_0980
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_0973KEGG: bcj:BCAM2226 ABC transporter ATP-binding membrane protein. (53 aa)    
Predicted Functional Partners:
Tint_0974
KEGG: mlo:mll4972 hypothetical protein.
       0.776
Tint_0976
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acr:Acry_0298 ABC-type Fe3+ transport system permease component-like protein.
       0.776
Tint_0975
KEGG: csa:Csal_0550 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.773
Tint_0977
PFAM: extracellular solute-binding protein family 1; KEGG: acr:Acry_0297 ABC-type Fe3+ transport system periplasmic component-like protein.
       0.723
Tint_0978
TIGRFAM: TonB family protein; KEGG: afr:AFE_2304 TonB family protein.
       0.723
Tint_0979
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: acr:Acry_1461 biopolymer transport protein ExbD/TolR.
       0.723
Tint_0972
Hypothetical protein; KEGG: similar to CG3168-PA, isoform A; K06258 MFS transporter, VNT family, synaptic vesicle glycoprotein 2.
       0.613
Tint_0980
PFAM: MotA/TolQ/ExbB proton channel; KEGG: afr:AFE_2270 MotA/TolQ/ExbB proton channel family protein.
       0.506
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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