STRINGSTRING
Cseg_3071 Cseg_3071 Cseg_3322 Cseg_3322 Cseg_3072 Cseg_3072 Cseg_3074 Cseg_3074 Cseg_3291 Cseg_3291 Cseg_3255 Cseg_3255 Cseg_3312 Cseg_3312 Cseg_1570 Cseg_1570 Cseg_2408 Cseg_2408 Cseg_0781 Cseg_0781 Cseg_3309 Cseg_3309
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_3071PFAM: major facilitator superfamily MFS_1; KEGG: bcj:BCAM2790 putative 3-hydroxyphenylpropionic transporter MhpT. (407 aa)    
Predicted Functional Partners:
Cseg_3322
PFAM: General substrate transporter; KEGG: ccs:CCNA_01031 transporter.
  
   
 0.518
Cseg_3072
PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_6949 feruloyl-CoA synthase.
 
     0.507
Cseg_3074
KEGG: pfl:PFL_4906 amino acid permease; manually curated; PFAM: amino acid permease-associated region.
  
   
 0.496
Cseg_3291
PFAM: major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_3357 major facilitator transporter.
  
     0.475
Cseg_3255
PFAM: General substrate transporter; KEGG: ccs:CCNA_01071 alpha-ketoglutarate permease.
  
   
 0.465
Cseg_3312
PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01039 hexuronate transporter.
  
     0.459
Cseg_1570
PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_01576 transporter.
  
     0.453
Cseg_2408
PFAM: major facilitator superfamily MFS_1; KEGG: psa:PST_0102 MFS family transporter.
  
     0.446
Cseg_0781
PFAM: major facilitator superfamily MFS_1; KEGG: pzu:PHZ_c0730 major facilitator family transporter.
  
     0.441
Cseg_3309
PFAM: major facilitator superfamily MFS_1; KEGG: cak:Caul_2075 major facilitator transporter.
  
     0.432
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.