STRINGSTRING
Sros_1519 Sros_1519 Sros_1885 Sros_1885 bioB bioB Sros_1879 Sros_1879 bioD bioD Sros_6023 Sros_6023 Sros_1520 Sros_1520 Sros_1165 Sros_1165 Sros_9236 Sros_9236 Sros_8308 Sros_8308 kbl kbl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_1519KEGG: bcj:BCAS0137 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (464 aa)    
Predicted Functional Partners:
Sros_1885
KEGG: cps:CPS_0095 hypothetical protein.
 
  
 0.884
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
  
 0.862
Sros_1879
KEGG: swi:Swit_2503 AsnC family transcriptional regulator.
 
   
 0.828
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
  
 0.821
Sros_6023
KEGG: mlo:mll2947 hypothetical protein.
 
  
 0.803
Sros_1520
KEGG: vha:VIBHAR_01795 alanine dehydrogenase; Belongs to the AlaDH/PNT family.
     
 0.637
Sros_1165
KEGG: sml:Smlt4020 putative N-acetylglucosamine-6- phosphate deacetylase.
     
 0.608
Sros_9236
KEGG: cvi:CV_0803 5-aminolevulinate synthase.
 
  
 0.543
Sros_8308
KEGG: mxa:MXAN_1258 8-amino-7-oxononanoate synthase.
 
  
 0.540
kbl
Glycine C-acetyltransferase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
 
  
 0.540
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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