STRINGSTRING
ADU36585.1 ADU36585.1 ADU36586.1 ADU36586.1 ADU35454.1 ADU35454.1 ADU36588.1 ADU36588.1 ADU38905.1 ADU38905.1 ADU38992.1 ADU38992.1 ADU36589.1 ADU36589.1 ADU38000.1 ADU38000.1 guaA guaA argD argD ADU39876.1 ADU39876.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ADU36585.1PFAM: aminotransferase class I and II; KEGG: bcj:BCAS0375 putative aspartate aminotransferase. (388 aa)    
Predicted Functional Partners:
ADU36586.1
KEGG: dap:Dacet_1979 hypothetical protein.
       0.615
ADU35454.1
KEGG: vap:Vapar_1152 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein.
     
 0.476
ADU36588.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vap:Vapar_3258 transcriptional regulator, LysR family.
       0.461
ADU38905.1
ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
   
 0.452
ADU38992.1
PFAM: Polyprenyl synthetase; KEGG: vap:Vapar_4219 trans-hexaprenyltranstransferase; Belongs to the FPP/GGPP synthase family.
 
  
 0.440
ADU36589.1
KEGG: vap:Vapar_3257 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase.
  
 
 0.434
ADU38000.1
KEGG: vap:Vapar_2044 NAD(P)H dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone).
  
    0.423
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
 
  
 0.412
argD
KEGG: vap:Vapar_1452 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
  
 0.406
ADU39876.1
KEGG: cse:Cseg_4131 citrate (Si)-synthase; PFAM: Citrate synthase; Belongs to the citrate synthase family.
 
 
 0.400
Your Current Organism:
Variovorax paradoxus EPS
NCBI taxonomy Id: 595537
Other names: V. paradoxus EPS, Variovorax paradoxus str. EPS, Variovorax paradoxus strain EPS
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