STRINGSTRING
ADG17445.1 ADG17445.1 ADG16095.1 ADG16095.1 ADG18303.1 ADG18303.1 ADG18577.1 ADG18577.1 ADG17057.1 ADG17057.1 ADG17446.1 ADG17446.1 rplD rplD rplJ rplJ efp efp priB priB trmD trmD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADG17445.1KEGG: bcj:BCAS0456 hypothetical protein. (278 aa)    
Predicted Functional Partners:
ADG16095.1
MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
    
 0.904
ADG18303.1
PFAM: aminotransferase class-III; KEGG: bpy:Bphyt_4665 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.900
ADG18577.1
Acyl-homoserine-lactone synthase; KEGG: bxe:Bxe_B0608 putative autoinducer synthesis protein; PFAM: autoinducer synthesis protein.
     
  0.900
ADG17057.1
KEGG: bpy:Bphyt_3777 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein.
 
 
   0.658
ADG17446.1
KEGG: bac:BamMC406_6268 alkylphosphonate utilization operon protein PhnA; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein.
       0.572
rplD
Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel.
  
    0.535
rplJ
Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
  
    0.516
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
  
 0.510
priB
Putative primosomal replication protein N, PriB; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
 
    0.456
trmD
tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
   
    0.431
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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