STRINGSTRING
ADZ90821.1 ADZ90821.1 rutC rutC ADZ90820.1 ADZ90820.1 ADZ90231.1 ADZ90231.1 rph rph ADZ90822.1 ADZ90822.1 ADZ90823.1 ADZ90823.1 nnrD nnrD ADZ90156.1 ADZ90156.1
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
ADZ90821.1PFAM: Endoribonuclease L-PSP; KEGG: bcj:BCAS0492 putative endoribonuclease L-PSP family protein. (132 aa)    
Predicted Functional Partners:
rutC
Pyrimidine utilization protein C; May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation.
  
   
 0.742
ADZ90820.1
KEGG: pna:Pnap_2107 benzoate transporter; TIGRFAM: Benzoate membrane transport protein; PFAM: Benzoate membrane transport protein.
       0.612
ADZ90231.1
Amino acid adenylation domain protein; SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: pfs:PFLU3223 putative non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
  
  
 0.524
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
  
 
 0.464
ADZ90822.1
KEGG: psa:PST_1670 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.458
ADZ90823.1
KEGG: avn:Avin_08610 benzoate 1,2-dioxygenase reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; Ferredoxin.
       0.456
nnrD
YjeF-related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
  
  
 0.450
ADZ90156.1
PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; KEGG: shl:Shal_3052 aspartate carbamoyltransferase catalytic subunit.
  
    0.443
Your Current Organism:
Marinomonas mediterranea
NCBI taxonomy Id: 717774
Other names: M. mediterranea MMB-1, Marinomonas mediterranea MMB-1, Marinomonas mediterranea str. MMB-1, Marinomonas mediterranea strain MMB-1
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