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Hden_0918 Hden_0918 Hden_0917 Hden_0917 Hden_0919 Hden_0919 Hden_3442 Hden_3442 Hden_0936 Hden_0936 Hden_0937 Hden_0937 Hden_2823 Hden_2823 Hden_2113 Hden_2113 Hden_0434 Hden_0434 Hden_2719 Hden_2719 Hden_1150 Hden_1150
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
Hden_0918KEGG: bcj:BCAS0583 efflux system transport protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (440 aa)    
Predicted Functional Partners:
Hden_0917
Acriflavin resistance protein; KEGG: gvi:gll0876 AcrB/AcrD/AcrF family multidrug efflux protein; manually curated; PFAM: acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   0.965
Hden_0919
KEGG: esa:ESA_02519 hypothetical protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
 
 
 0.878
Hden_3442
PFAM: acriflavin resistance protein; KEGG: rpc:RPC_4615 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.853
Hden_0936
PFAM: acriflavin resistance protein; KEGG: nwi:Nwi_1521 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.770
Hden_0937
PFAM: acriflavin resistance protein; KEGG: bja:blr4457 AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.770
Hden_2823
KEGG: swi:Swit_3712 CzcA family heavy metal efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.675
Hden_2113
KEGG: bja:blr6726 AcrB/AcrD/AcrF family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein.
 
   0.648
Hden_0434
Heavy metal efflux pump, CzcA family; KEGG: mea:Mex_1p2655 cobalt-zinc-cadmium resistance protein CzcA (cation efflux system protein CzcA); TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.630
Hden_2719
KEGG: msl:Msil_2463 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein.
 
   0.620
Hden_1150
KEGG: azc:AZC_3910 hydrophobe/amphiphile efflux-1; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein.
 
   0.614
Your Current Organism:
Hyphomicrobium denitrificans ATCC 51888
NCBI taxonomy Id: 582899
Other names: H. denitrificans ATCC 51888, Hyphomicrobium denitrificans str. ATCC 51888, Hyphomicrobium denitrificans strain ATCC 51888
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