Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACT51534.1 | ACT51884.1 | Msip34_2292 | Msip34_2647 | PFAM: protein of unknown function DUF6 transmembrane; KEGG: abc:ACICU_01545 DMT family permease. | PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcj:BCAS0602 hypothetical protein. | 0.743 |
ACT51884.1 | ACT51534.1 | Msip34_2647 | Msip34_2292 | PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcj:BCAS0602 hypothetical protein. | PFAM: protein of unknown function DUF6 transmembrane; KEGG: abc:ACICU_01545 DMT family permease. | 0.743 |
ACT51884.1 | ACT51885.1 | Msip34_2647 | Msip34_2648 | PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcj:BCAS0602 hypothetical protein. | Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_4124 AraC family transcriptional regulator. | 0.670 |
ACT51885.1 | ACT51884.1 | Msip34_2648 | Msip34_2647 | Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_4124 AraC family transcriptional regulator. | PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcj:BCAS0602 hypothetical protein. | 0.670 |