STRINGSTRING
Aave_0452 Aave_0452 Aave_0449 Aave_0449 Aave_0448 Aave_0448 Aave_0455 Aave_0455 Aave_0466 Aave_0466 Aave_0453 Aave_0453 Aave_4387 Aave_4387 Aave_0463 Aave_0463 Aave_4412 Aave_4412 Aave_4392 Aave_4392 Aave_0450 Aave_0450
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Aave_0452TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein; KEGG: bma:BMAA1630 type III secretion inner membrane protein SctV. (687 aa)    
Predicted Functional Partners:
Aave_0449
TIGRFAM: Yop virulence translocation R; PFAM: type III secretion system inner membrane P protein; KEGG: rso:RSp0860 hrp conserved hrcR transmembrane protein.
 
 
 0.990
Aave_0448
TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ, family 3; KEGG: rso:RSp0859 hrp conserved hrcS transmembrane protein.
 
 
 0.989
Aave_0455
TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein; KEGG: xom:XOO_0083 HrcT protein.
 
 
 0.985
Aave_0466
TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein; KEGG: rso:RSp0867 hrp conserved lipoprotein hrcJ transmembrane.
 
 
 0.976
Aave_0453
TIGRFAM: type III secretion protein, YscU/HrpY family; PFAM: type III secretion exporter; KEGG: xcb:XC_3012 HrcU protein.
 
 0.955
Aave_4387
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rfr:Rfer_0558 flagellar motor switch FliN.
 
  
 0.914
Aave_0463
KEGG: xom:XOO_0085 HrcN protein; TIGRFAM: ATPase, FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase.
 
  
 0.889
Aave_4412
PFAM: type III secretion exporter; KEGG: rfr:Rfer_3706 type III secretion exporter.
 
 0.889
Aave_4392
Flagellar protein export ATPase FliI; KEGG: rfr:Rfer_0553 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase.
 
  
 0.888
Aave_0450
TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bpm:BURPS1710b_A0677 type III secretion inner membrane protein SctQ.
  
  
 0.860
Your Current Organism:
Acidovorax citrulli
NCBI taxonomy Id: 397945
Other names: A. citrulli AAC00-1, Acidovorax avenae subsp. citrulli AAC00-1, Acidovorax citrulli AAC00-1, Acidovorax citrulli str. AAC00-1, Acidovorax citrulli strain AAC00-1
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