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BPSL0069 BPSL0069 BPSL0070 BPSL0070 BPSL0072 BPSL0072 BPSL0071 BPSL0071 BPSS1022 BPSS1022 BPSS0748 BPSS0748 BPSS1027 BPSS1027 BPSS0536 BPSS0536 BPSS1352 BPSS1352 BPSS1025 BPSS1025 BPSS1275 BPSS1275
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
BPSL0069Similar to Pseudomonas fluorescens transmembrane regulator PrtR SWALL:Q9KIN0 (EMBL:AF228766) (242 aa) fasta scores: E(): 2.2e-34, 47.45% id in 236 aa, and to Xanthomonas axonopodis pv. citri str. 306 transmembrane regulator protein PrtR SWALL:AAM38824 (EMBL:AE012047) (250 aa) fasta scores: E(): 2.5e-26, 40.63% id in 251 aa. (252 aa)    
Predicted Functional Partners:
BPSL0070
Similar to Pseudomonas fluorescens putative RNA polymerase sigma factor PrtI SWALL:Q9KIM9 (EMBL:AF228767) (165 aa) fasta scores: E(): 1.5e-36, 61.67% id in 167 aa, and to Xanthomonas axonopodis pv. citri str. 306 ecf sigma factor PrtI SWALL:AAM38825 (EMBL:AE012047) (171 aa) fasta scores: E(): 3.9e-32, 56.97% id in 172 aa; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.907
BPSL0072
Putative type-b cytochrome; Similar to Escherichia coli cytochrome b561 CybB SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 1.5e-07, 31.66% id in 180 aa, and to Xanthomonas axonopodis pv. citri str. 306 cytochrome b561 YodB SWALL:AAM38827 (EMBL:AE012047) (180 aa) fasta scores: E(): 7.9e-37, 60% id in 170 aa.
 
     0.698
BPSL0071
Putative catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
 
    0.669
BPSS1022
Putative RNA polymerase sigma factor; Similar to Rhizobium leguminosarum extracytoplasmic sigma factor EcfR SWALL:Q9X5V5 (EMBL:AF127795) (186 aa) fasta scores: E(): 2.1e-22, 48.64% id in 148 aa, and to Bradyrhizobium japonicum sigma factor EcfA SWALL:Q9EXR8 (EMBL:AJ304855) (172 aa) fasta scores: E(): 6.5e-22, 52.41% id in 166 aa, and to Rhizobium loti RNA polymerase sigma factor mlr0407 SWALL:Q98MW7 (EMBL:AP002994) (183 aa) fasta scores: E(): 3.6e-21, 45.86% id in 157 aa; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.530
BPSS0748
Putative exported protein; Similar to Pseudomonas syringae pv. maculicola hypothetical protein SWALL:Q93TD7 (EMBL:AF359557) (126 aa) fasta scores: E(): 5e-20, 51.69% id in 118 aa, and to Agrobacterium tumefaciens hypothetical protein ATU1486 or AGR_C_2741 SWALL:Q8UFB2 (EMBL:AE009107) (129 aa) fasta scores: E(): 1.8e-15, 44.27% id in 131 aa.
 
     0.485
BPSS1027
Similar to Escherichia coli probable RNA polymerase sigma factor FecI or b4293 SWALL:FECI_ECOLI (SWALL:P23484) (173 aa) fasta scores: E(): 1.2e-23, 47.33% id in 150 aa, and to Pseudomonas aeruginosa putative RNA polymerase sigma factor pa3899 SWALL:Q9HXB4 (EMBL:AE004807) (169 aa) fasta scores: E(): 2.6e-33, 53.61% id in 166 aa, and to Pseudomonas aeruginosa putative RNA polymerase sigma factor pa1912 SWALL:Q9I2J2 (EMBL:AE004617) (168 aa) fasta scores: E(): 1.3e-30, 53.98% id in 163 aa, and to Bordetella avium RhuI rhuI SWALL:AAM28266 (EMBL:AY095952) (168 aa) fasta scores: E(): 5.7e-27, [...]
 
 
 0.468
BPSS0536
Putative 3-hydroxydecanoyl-ACP:CoA transacylase; Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 subunit A RhlA SWALL:RHLA_PSEAE (SWALL:Q51559) (295 aa) fasta scores: E(): 4e-45, 48.49% id in 266 aa, and to Pseudomonas putida (R)-3-hydroxydecanoyl-ACP:CoA transacylase PhaG SWALL:PHAG_PSEPU (SWALL:O85207) (295 aa) fasta scores: E(): 8.2e-42, 42.64% id in 272 aa. Almost identical to BPSS1352, 99.666% identity (99.666% ungapped) in 299 aa overlap.
  
     0.454
BPSS1352
Putative fatty acid biosynthetic protein; Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 subunit A RhlA or pa3479 SWALL:RHLA_PSEAE (SWALL:Q51559) (295 aa) fasta scores: E(): 2.7e-45, 48.49% id in 266 aa, and to Pseudomonas aeruginosa 3- hydroxyacyl-CoA-acyl carrier protein transferase PhaG or Qin or pa0730 SWALL:PHAG_PSEAE (SWALL:Q51553) (300 aa) fasta scores: E(): 2.4e-43, 43.11% id in 276 aa, and to Pseudomonas putida 3- hydroxyacyl-CoA-acyl carrier protein transferase PhaG SWALL:PHAG_PSEPU (SWALL:O85207) (295 aa) fasta scores: E(): 3.5e-42, 43.01% id in 272 aa.
  
     0.454
BPSS1025
Putative lipoprotein; Similar to Ralstonia solanacearum probable transmembrane protein rsc2984 or rs01242 SWALL:Q8XV47 (EMBL:AL646073) (148 aa) fasta scores: E(): 1.5e-18, 54.63% id in 97 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5359 SWALL:Q9HTJ9 (EMBL:AE004947) (151 aa) fasta scores: E(): 5.5e-16, 45.76% id in 118 aa, and to Pseudomonas syringae pv. maculicola hypothetical 13.4 kDa protein SWALL:Q93TD7 (EMBL:AF359557) (126 aa) fasta scores: E(): 6.3e-16, 45.52% id in 123 aa.
 
     0.441
BPSS1275
Similar to Pseudomonas syringae RNA polymerase sigma factor HrpL SWALL:HRPL_PSESY (SWALL:P37929) (184 aa) fasta scores: E(): 7e-10, 31.09% id in 164 aa, and to Ralstonia solanacearum probable RNA polymerase sigma factor transcription regulator protein rsp1651 or rs02210 SWALL:Q8XPI9 (EMBL:AL646086) (208 aa) fasta scores: E(): 4.6e-14, 38.23% id in 170 aa, and to Rhizobium meliloti putative rpoE6 RNA polymerase sigma factor rpoE6 or ra0075 or sma0143 SWALL:Q930W9 (EMBL:AE007202) (201 aa) fasta scores: E(): 8.2e-14, 37.03% id in 162 aa; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.440
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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