STRINGSTRING
BPSL0112 BPSL0112 BPSL0113 BPSL0113
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL0112Putative membrane protein; No significant database matches. (94 aa)    
Predicted Functional Partners:
BPSL0113
Conserved hypothetical protein; Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc2888 or rs00212 SWALL:Q8XVE3 (EMBL:AL646072) (152 aa) fasta scores: E(): 1.1e-20, 44.58% id in 157 aa. C-terminal region is similar to Ralstonia solanacearum hypothetical protein rsc2388 or rs02761 SWALL:Q8XWT2 (EMBL:AL646069) (84 aa) fasta scores: E(): 2.7e-11, 48.14% id in 81 aa. C-terminal region is similar to BPSL1373, 55.224% identity (55.224% ungapped) in 134 aa overlap.
       0.773
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.