STRINGSTRING
BPSL0166 BPSL0166 BPSL0168 BPSL0168 BPSL0159 BPSL0159 BPSL0160 BPSL0160 BPSS1065 BPSS1065 BPSL0169 BPSL0169 BPSL0170 BPSL0170 BPSL0171 BPSL0171 BPSL0145 BPSL0145 BPSS1088 BPSS1088 BPSL0154 BPSL0154
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL0166Similar to bacteriophage P2 tail protein X SWALL:VPX_BPP2 (SWALL:P51772) (67 aa) fasta scores: E(): 2.4e-11, 69.81% id in 53 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein X SWALL:AAM42247 (EMBL:AE012412) (69 aa) fasta scores: E(): 3.6e-13, 59.42% id in 69 aa. Identical to BPSS1069, 100.000% identity (100.000% ungapped) in 68 aa overlap. (68 aa)    
Predicted Functional Partners:
BPSL0168
Similar to bacteriophage P2 head completion/stabilization protein L SWALL:VPL_BPP2 (SWALL:P25475) (169 aa) fasta scores: E(): 2.8e-15, 42.25% id in 142 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1935 or rs03504 SWALL:Q8XY28 (EMBL:AL646067) (159 aa) fasta scores: E(): 2.8e-26, 55.34% id in 159 aa. Similar to BPSS1067, 98.113% identity (98.113% ungapped) in 159 aa overlap.
 
    0.981
BPSL0159
Similar to bacteriophage P2 tail completion protein S SWALL:VPS_BPP2 (SWALL:P36934) (150 aa) fasta scores: E(): 9.2e-13, 36.84% id in 152 aa, and to Xanthomonas axonopodis pv. citri str. 306 phage-related tail protein S SWALL:AAM37500 (EMBL:AE011905) (148 aa) fasta scores: E(): 4e-25, 50.99% id in 151 aa. Similar to BPSS1075, 94.194% identity (94.194% ungapped) in 155 aa overlap.
 
    0.978
BPSL0160
Similar to bacteriophage P2 tail completion protein R SWALL:VPR_BPP2 (SWALL:P36933) (155 aa) fasta scores: E(): 9.4e-13, 37.87% id in 132 aa, and to Ralstonia solanacearum probable tail completion-like protein rsc1929 or rs03499 SWALL:Q8XY34 (EMBL:AL646067) (144 aa) fasta scores: E(): 2.2e-19, 44.92% id in 138 aa. Similar to BPSS1074, 97.101% identity (97.101% ungapped) in 138 aa overlap.
 
    0.978
BPSS1065
Similar to Bacteriophage P2 major capsid protein precursor N SWALL:VPN_BPP2 (SWALL:P25477) (357 aa) fasta scores: E(): 5.6e-72, 54.97% id in 342 aa, and to Bacteriophage phi CTX Pseudomonas aeruginosa phage phi ctx SWALL:Q9ZXM3 (EMBL:AB008550) (338 aa) fasta scores: E(): 1.7e-81, 64.2% id in 338 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1937 or rs03506 SWALL:Q8XY26 (EMBL:AL646067) (338 aa) fasta scores: E(): 2.6e-81, 62.9% id in 337 aa.
 
  
 0.973
BPSL0169
Similar to bacteriophage P2 terminase, endonuclease subunit M SWALL:VPM_BPP2 (SWALL:P25476) (247 aa) fasta scores: E(): 2.7e-27, 46.29% id in 216 aa, and to Ralstonia solanacearum probable bacteriophage protein rsc1936 or rs03505 SWALL:Q8XY27 (EMBL:AL646067) (240 aa) fasta scores: E(): 8.6e-30, 48.73% id in 238 aa. Similar to BPSS1066, 99.561% identity (99.561% ungapped) in 228 aa overlap.
 
    0.960
BPSL0170
Similar to bacteriophage P2 major capsid protein precursor N SWALL:VPN_BPP2 (SWALL:P25477) (357 aa) fasta scores: E(): 5.7e-70, 55.84% id in 342 aa, and to bacteriophage phi CTX protein SWALL:Q9ZXM3 (EMBL:AB008550) (338 aa) fasta scores: E(): 1.6e-83, 64.39% id in 337 aa. Similar to BPSS1065, 97.626% identity (97.917% ungapped) in 337 aa overlap.
 
    0.960
BPSL0171
Similar to bacteriophage P2 presumed capsid scaffolding protein O SWALL:VPO_BPP2 (SWALL:P25478) (284 aa) fasta scores: E(): 3e-24, 43.44% id in 290 aa, and to bacteriophage phi CTX protein SWALL:Q9ZXM4 (EMBL:AB008550) (273 aa) fasta scores: E(): 9e-31, 44.71% id in 284 aa. Similar to BPSS1064, 98.885% identity (98.885% ungapped) in 269 aa overlap.
 
    0.955
BPSL0145
Putative phage protein; Similar to bacteriophage phi CTX Orf26 protein SWALL:Q9ZXJ9 (EMBL:AB008550) (146 aa) fasta scores: E(): 2.6e-21, 51.2% id in 125 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 phage-related tail protein U SWALL:AAM42265 (EMBL:AE012413) (133 aa) fasta scores: E(): 3.7e-21, 53.6% id in 125 aa. Similar to BPSS1088, 98.582% identity (98.582% ungapped) in 141 aa overlap.
 
 
 0.951
BPSS1088
Putative bacteriophage tail-related protein; Similar to Bacteriophage phi CTX orf26 SWALL:Q9ZXJ9 (EMBL:AB008550) (146 aa) fasta scores: E(): 1.1e-21, 52% id in 125 aa, and to Xanthomonas campestris phage-related tail protein U or xcc2993 SWALL:AAM42265 (EMBL:AE012413) (133 aa) fasta scores: E(): 2.1e-21, 52.8% id in 125 aa, and to Ralstonia solanacearum probable phage-related tail protein rsc1913 or rs03482 SWALL:Q8XY50 (EMBL:AL646067) (140 aa) fasta scores: E(): 2.3e-20, 45.31% id in 128 aa.
 
 
 0.951
BPSL0154
Similar to bacteriophage P2 baseplate assembly protein J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 2.4e-45, 45.6% id in 296 aa, and to Salmonella typhi phage baseplate assembly protein STY3689 SWALL:Q8Z344 (EMBL:AL627279) (302 aa) fasta scores: E(): 2.3e-48, 49.66% id in 296 aa. Similar to BPSS1080, 95.017% identity (95.017% ungapped) in 301 aa overlap.
 
 
 0.949
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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