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BPSL0342 BPSL0342 BPSL0341 BPSL0341 BPSL0343 BPSL0343 BPSL0340 BPSL0340 BPSS0602 BPSS0602 BPSS1034 BPSS1034 BPSS0244 BPSS0244 BPSL1010 BPSL1010 BPSS0979 BPSS0979 BPSS0972 BPSS0972 BPSL1308 BPSL1308
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL0342Putative membrane protein; Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1375 or rs02083 SWALL:Q8XQB1 (EMBL:AL646084) (100 aa) fasta scores: E(): 1.8e-24, 73.46% id in 98 aa, and to Rhizobium loti hypothetical protein msl2426 SWALL:Q98IF5 (EMBL:AP002999) (99 aa) fasta scores: E(): 7.8e-23, 69.69% id in 99 aa. (100 aa)    
Predicted Functional Partners:
BPSL0341
Putative transport protein; Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp1376 or rs02082 SWALL:Q8XQB0 (EMBL:AL646084) (250 aa) fasta scores: E(): 4.5e-70, 78.47% id in 223 aa. Weakly similar to Bacillus subtilis branched-chain amino acid transport protein AzlC SWALL:AZLC_BACSU (SWALL:O07942) (254 aa) fasta scores: E(): 8.2e-10, 21.25% id in 240 aa.
 
   
 0.953
BPSL0343
Putative hydrolase; Similar to Deinococcus radiodurans hydrolase-related protein dr1403 SWALL:Q9RUI3 (EMBL:AE001985) (277 aa) fasta scores: E(): 2.8e-32, 38.62% id in 277 aa. C-terminus is similar to the C-terminal region of Ralstonia solanacearum putative hydrolase-related protein rsc3406 or rs01715 SWALL:Q8XTY9 (EMBL:AL646075) (266 aa) fasta scores: E(): 1.3e-29, 38.96% id in 231 aa.
       0.774
BPSL0340
AsnC family regulatory protein; Similar to Escherichia coli, and Enterobacter aerogenes leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI SWALL:LRP_ENTAE (SWALL:P19494) (163 aa) fasta scores: E(): 1.5e-21, 44% id in 150 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1377 or rs02081 SWALL:Q8XQA9 (EMBL:AL646084) (152 aa) fasta scores: E(): 2.2e-48, 80.92% id in 152 aa.
       0.535
BPSS0602
Hypothetical protein; Poor database matches. Weakly similar to the C-terminal region of Caulobacter crescentus hypothetical protein cc3240 SWALL:Q9A3G4 (EMBL:AE005988) (318 aa) fasta scores: E(): 1.5e-16, 29.63% id in 189 aa.
  
     0.505
BPSS1034
Putative membrane protein; Similar to Rhizobium loti hypothetical protein Mll1752 SWALL:Q98JW1 (EMBL:AP002998) (178 aa) fasta scores: E(): 2.7e-22, 42.44% id in 172 aa, and to Rhizobium loti nickel-cobalt-cadmium resistance protein mlr6490 SWALL:Q989C1 (EMBL:AP003009) (176 aa) fasta scores: E(): 3e-06, 30.95% id in 168 aa, and to Sulfolobus tokodaii hypothetical protein St1187 SWALL:Q972E1 (EMBL:AP000985) (199 aa) fasta scores: E(): 7.1e-06, 29.65% id in 145 aa.
  
     0.471
BPSS0244
Putative exported heme receptor protein; Similar to Caulobacter crescentus TonB-dependent receptor cc2194 SWALL:Q9A6A0 (EMBL:AE005891) (733 aa) fasta scores: E(): 4.5e-100, 41.94% id in 739 aa, and to Vibrio mimicus heme receptor precursor MhuA SWALL:Q9AQK5 (EMBL:AB048382) (710 aa) fasta scores: E(): 1.9e-33, 29.43% id in 727 aa.
  
     0.470
BPSL1010
Putative lipoprotein; Similar to Agrobacterium tumefaciens hypothetical protein atu4730 or agr_l_303 SWALL:Q8U6S6 (EMBL:AE009401) (316 aa) fasta scores: E(): 8e-32, 39.75% id in 327 aa, and to Xanthomonas axonopodis pv. citri str. 306 conserved hypothetical protein xac1424 SWALL:AAM36295 (EMBL:AE011774) (342 aa) fasta scores: E(): 1.1e-16, 35.04% id in 351 aa.
  
     0.467
BPSS0979
Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.5e-11, 30.13% id in 365 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsc2136 or rs01467 SWALL:Q8XXH8 (EMBL:AL646068) (352 aa) fasta scores: E(): 4.2e-38, 40.27% id in 370 aa.
  
     0.461
BPSS0972
Putative exported protein; Similar to Chlorobium tepidum hypothetical protein ct1745 SWALL:AAM72967 (EMBL:AE012928) (267 aa) fasta scores: E(): 1.1e-17, 33.85% id in 254 aa, and to Chlorobium tepidum hypothetical protein ct0395 SWALL:AAM71641 (EMBL:AE012816) (265 aa) fasta scores: E(): 1.3e-17, 38.72% id in 266 aa.
  
     0.443
BPSL1308
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsp0711 or rs01738 SWALL:Q8XRX0 (EMBL:AL646080) (277 aa) fasta scores: E(): 3.6e-60, 58.42% id in 267 aa, and to Rhizobium loti hypothetical protein mll0509 SWALL:Q98MN1 (EMBL:AP002995) (295 aa) fasta scores: E(): 2.1e-21, 35.61% id in 278 aa. Note: This CDS is shorter in its N-terminal region than most of its database matches.
  
     0.441
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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