STRINGSTRING
BPSL0384 BPSL0384 BPSL0429 BPSL0429 BPSL0536 BPSL0536 BPSL2395 BPSL2395 BPSL2836 BPSL2836 BPSL0382 BPSL0382 BPSL0326 BPSL0326 BPSL0457 BPSL0457 BPSL0387 BPSL0387 BPSL1194 BPSL1194 BPSL0392 BPSL0392
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL0384Similar to Ralstonia solanacearum hypothetical protein rsc0288 or rs03255 SWALL:Q8Y2P7 (EMBL:AL646058) (105 aa) fasta scores: E(): 3.5e-11, 42.72% id in 110 aa. (107 aa)    
Predicted Functional Partners:
BPSL0429
Conserved hypothetical protein; Similar to Ralstonia solanacearum putative transmembrane protein rsc0335 or rs03302 SWALL:Q8Y2K0 (EMBL:AL646058) (189 aa) fasta scores: E(): 1.2e-11, 36.86% id in 198 aa.
 
     0.780
BPSL0536
Putative exported protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0411 or rs03379 SWALL:Q8Y2C5 (EMBL:AL646059) (210 aa) fasta scores: E(): 2.7e-28, 49.18% id in 183 aa, and to Pseudomonas aeruginosa hypothetical protein pa4459 SWALL:Q9HVV8 (EMBL:AE004860) (190 aa) fasta scores: E(): 8.8e-07, 27.89% id in 190 aa.
  
     0.720
BPSL2395
Putative lipoprotein; Similar to Ralstonia solanacearum probable lipoprotein rsc2382 or rs01163 SWALL:Q8XWT8 (EMBL:AL646069) (180 aa) fasta scores: E(): 3.6e-28, 47.97% id in 173 aa. N-terminus is similar to the N-terminal region of Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor acrA or MtcA or Lir SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 0.12, 30.15% id in 126 aa.
  
     0.718
BPSL2836
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc2657 or rs04554 SWALL:Q8XW18 (EMBL:AL646071) (1426 aa) fasta scores: E(): 8.9e-140, 35.4% id in 1401 aa, and to Xanthomonas campestris hypothetical protein Xcc2608 SWALL:Q8P7K3 (EMBL:AE012372) (1296 aa) fasta scores: E(): 1e-24, 25.29% id in 1423 aa, and to Xanthomonas axonopodis hypothetical protein Xac2769 SWALL:Q8PIX6 (EMBL:AE011917) (1306 aa) fasta scores: E(): 2.7e-24, 25.55% id in 1444 aa.
  
     0.714
BPSL0382
Putative membrane protein; Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc0286 or rs03253 SWALL:Q8Y2P9 (EMBL:AL646058) (238 aa) fasta scores: E(): 3.5e-09, 40.9% id in 286 aa, and to Xanthomonas campestris hypothetical protein xcc3862 SWALL:AAM43093 (EMBL:AE012507) (286 aa) fasta scores: E(): 1.5e-06, 30.61% id in 294 aa.
 
     0.710
BPSL0326
Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.1e-10, 31.45% id in 391 aa, and to Ralstonia solanacearum probable porin precursor transmembrane protein rsp0337 or rs00714 SWALL:Q8XSY0 (EMBL:AL646078) (351 aa) fasta scores: E(): 1.6e-71, 55.84% id in 351 aa.
  
     0.708
BPSL0457
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0366 or rs03334 SWALL:Q8Y2H0 (EMBL:AL646058) (70 aa) fasta scores: E(): 4.5e-12, 58.73% id in 63 aa.
  
     0.681
BPSL0387
Similar to Ralstonia solanacearum hypothetical protein rsc0297 or rs03264 SWALL:Q8Y2N8 (EMBL:AL646058) (85 aa) fasta scores: E(): 7.8e-19, 68.6% id in 86 aa. Possible alternative translational start sites.
  
     0.676
BPSL1194
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc2079 or rs03644 SWALL:Q8XXN4 (EMBL:AL646068) (146 aa) fasta scores: E(): 2.5e-16, 50% id in 140 aa.
  
     0.673
BPSL0392
Conserved hypothetical protein; Poor database matches. similar to Ralstonia solanacearum hypothetical protein rsc0305 or rs03272 SWALL:Q8Y2N0 (EMBL:AL646058) (294 aa) fasta scores: E(): 3.2e-07, 37.15% id in 288 aa. C-terminus is similar to the C-terminal region of Pseudomonas aeruginosa polyhydroxyalkanoate synthesis protein pa5060 SWALL:Q9HUC3 (EMBL:AE004919) (309 aa) fasta scores: E(): 0.011, 33.95% id in 215 aa.
  
     0.666
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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