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BPSL0466 BPSL0466 BPSL2502 BPSL2502 BPSS0316 BPSS0316 metN1 metN1 metN2 metN2 BPSS0190 BPSS0190 BPSL0465 BPSL0465 cysC-2 cysC-2 BPSL0467 BPSL0467
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
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[Homology]
Score
BPSL0466Putative exported protein; Similar to Pasteurella haemolytica outer membrane lipoprotein 3 precursor PlpC SWALL:PLPC_PASHA (SWALL:Q08870) (263 aa) fasta scores: E(): 5.1e-41, 49.41% id in 257 aa, and to the C-terminal region of Ralstonia solanacearum putative outermembrane signal peptide protein rsc3386 or rs06100 SWALL:Q8XU08 (EMBL:AL646075) (529 aa) fasta scores: E(): 5.9e-63, 66.79% id in 268 aa. Similar to BPSS0266, 63.806% identity (64.528% ungapped) in 268 aa overlap and to BPSL2501, 60.294% identity (62.121% ungapped) in 272 aa overlapNote, although CDS is similar to characteriz [...] (272 aa)    
Predicted Functional Partners:
BPSL2502
ABC transporter, membrane permease; Similar to Vibrio cholerae probable D-methionine transport system permease protein MetI or vc0906 SWALL:METI_VIBCH (SWALL:Q9KTJ6) (225 aa) fasta scores: E(): 7.6e-42, 59.71% id in 211 aa, Ralstonia solanacearum probable transmembrane ABC transporter protein rsc0921 or rs04492 SWALL:Q8Y0X2 (EMBL:AL646061) (217 aa) fasta scores: E(): 5.3e-55, 77.41% id in 217 aa, and to Escherichia coli D-methionine transport system permease protein MetI or b0198 SWALL:METI_ECOLI (SWALL:P31547) (217 aa) fasta scores: E(): 1.6e-36, 54.83% id in 217 aa.
 0.993
BPSS0316
Putative ACB transport system, membrane protein; Similar to Pseudomonas aeruginosa probable permease of ABC transporter pa2351 SWALL:Q9I1C7 (EMBL:AE004661) (217 aa) fasta scores: E(): 5.6e-52, 68.66% id in 217 aa, and to Brucella melitensis ABC transporter permease protein bmeii0336 SWALL:Q8YD41 (EMBL:AE009671) (230 aa) fasta scores: E(): 3.7e-47, 62.21% id in 217 aa.
 0.993
metN1
ABC transporter, ATP-binding component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.991
metN2
Putative ABC transport system, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.991
BPSS0190
Putative AraC-family transcriptional regulator (fragment); Pfam match to entry PF00165 HTH_AraC, Bacterial regulatory helix-turn-helix proteins, araC family, score 16.0, E-value 0.049.
  
    0.519
BPSL0465
Similar to Ralstonia solanacearum putative methyl-accepting chemotaxis transmembrane protein rsc2799 or rs05622 SWALL:Q8XVN1 (EMBL:AL646071) (515 aa) fasta scores: E(): 1.7e-104, 64.32% id in 513 aa. C-terminus is similar to the C-terminal region of Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 3.9e-56, 61.65% id in 326 aa. Simlar to BPSS1218, 54.386% identity (54.492% ungapped) in 513 aa overlap.
  
    0.482
cysC-2
Putative adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
   
  
 0.456
BPSL0467
Putative exported protein; Similar to Ralstonia solanacearum hypothetical signal peptide protein rsc1740 or rs02928 SWALL:Q8XYL8 (EMBL:AL646066) (329 aa) fasta scores: E(): 1.2e-77, 74.77% id in 329 aa, and to Pseudomonas aeruginosa hypothetical protein pa3836 SWALL:Q9HXG8 (EMBL:AE004801) (325 aa) fasta scores: E(): 2.9e-70, 67.83% id in 314 aa.
     
 0.426
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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