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lptA lptA BPSL0536 BPSL0536 BPSL0534 BPSL0534 lptD lptD BPSL0537 BPSL0537 BPSL0538 BPSL0538 BPSL2836 BPSL2836 FlgJ FlgJ flgC flgC ptsH ptsH BPSL0388 BPSL0388
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
lptAOstA-like protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. (221 aa)    
Predicted Functional Partners:
BPSL0536
Putative exported protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0411 or rs03379 SWALL:Q8Y2C5 (EMBL:AL646059) (210 aa) fasta scores: E(): 2.7e-28, 49.18% id in 183 aa, and to Pseudomonas aeruginosa hypothetical protein pa4459 SWALL:Q9HVV8 (EMBL:AE004860) (190 aa) fasta scores: E(): 8.8e-07, 27.89% id in 190 aa.
 
 
 0.996
BPSL0534
Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc0409 or rs03377 SWALL:Q8Y2C7 (EMBL:AL646059) (262 aa) fasta scores: E(): 9.2e-66, 79.11% id in 249 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q9EX70 (EMBL:AJ131690) (263 aa) fasta scores: E(): 1.1e-64, 80.4% id in 250 aa.
  
  
 0.981
lptD
Putative exported protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
 
 0.861
BPSL0537
Similar to Ralstonia solanacearum hypothetical protein rsc0412 or rs03380 SWALL:Q8Y2C4 (EMBL:AL646059) (195 aa) fasta scores: E(): 1e-34, 60.47% id in 167 aa, and to Pseudomonas aeruginosa hypothetical protein pa4458 SWALL:Q9HVV9 (EMBL:AE004860) (179 aa) fasta scores: E(): 9.8e-29, 52.9% id in 172 aa.
  
  
 0.783
BPSL0538
Similar to Ralstonia solanacearum hypothetical protein rsc0413 or rs03381 SWALL:Q8Y2C3 (EMBL:AL646059) (333 aa) fasta scores: E(): 5.4e-79, 69.11% id in 327 aa, and to Xanthomonas campestris polysialic acid capsule expression protein xcc2797 SWALL:AAM42069 (EMBL:AE012392) (333 aa) fasta scores: E(): 3.4e-68, 59.69% id in 325 aa. Similar to BPSL2770, 50.649% identity (52.000% ungapped) in 308 aa overlap; Belongs to the SIS family. GutQ/KpsF subfamily.
  
    0.782
BPSL2836
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc2657 or rs04554 SWALL:Q8XW18 (EMBL:AL646071) (1426 aa) fasta scores: E(): 8.9e-140, 35.4% id in 1401 aa, and to Xanthomonas campestris hypothetical protein Xcc2608 SWALL:Q8P7K3 (EMBL:AE012372) (1296 aa) fasta scores: E(): 1e-24, 25.29% id in 1423 aa, and to Xanthomonas axonopodis hypothetical protein Xac2769 SWALL:Q8PIX6 (EMBL:AE011917) (1306 aa) fasta scores: E(): 2.7e-24, 25.55% id in 1444 aa.
  
     0.738
FlgJ
Similar to Salmonella typhimurium peptidoglycan hydrolase FlgJ or FlaZ SWALL:FLGJ_SALTY (SWALL:P15931) (316 aa) fasta scores: E(): 3.5e-32, 43.43% id in 297 aa, and to Vibrio parahaemolyticus peptidoglycan hydrolase FlgJ SWALL:FLGJ_VIBPA (SWALL:Q9X9J3) (308 aa) fasta scores: E(): 6.9e-26, 33.97% id in 312 aa.
      
 0.729
flgC
Flagellar basal-body rod protein; Similar to Salmonella typhimurium, and Salmonella typhi flagellar basal-body rod protein FlgC or FlaW SWALL:FLGC_SALTY (SWALL:P16438) (134 aa) fasta scores: E(): 1.6e-28, 65.94% id in 138 aa, and to Yersinia pestis flagellar basal-body rod protein ypo1800 SWALL:Q8ZFB7 (EMBL:AJ414150) (134 aa) fasta scores: E(): 5.8e-30, 68.84% id in 138 aa.
    
   0.716
ptsH
Phosphocarrier protein HPr; Similar to Escherichia coli Salmonella typhimurium, and Salmonella typhi phosphocarrier protein HPr or PtsH SWALL:PTHP_ECOLI (SWALL:P07006) (85 aa) fasta scores: E(): 3.2e-08, 40.96% id in 83 aa, and to Alcaligenes eutrophus phosphocarrier protein hpr phbH SWALL:PTHP_ALCEU (SWALL:P23537) (89 aa) fasta scores: E(): 2.8e-26, 79.77% id in 89 aa.
  
  
 0.714
BPSL0388
Putative exported protein; Similar to Ralstonia solanacearum putative prolin-rich signal peptide protein rsc0299 or rs03266 SWALL:Q8Y2N6 (EMBL:AL646058) (355 aa) fasta scores: E(): 3e-17, 42.35% id in 366 aa.
  
     0.713
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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