STRINGSTRING
BPSL0726 BPSL0726 BPSL0727 BPSL0727 BPSL0728 BPSL0728 BPSL0725 BPSL0725 BPSL0724 BPSL0724 BPSL0702 BPSL0702 BPSL1888 BPSL1888 BPSL1120 BPSL1120 BPSL1004 BPSL1004 BPSS0443 BPSS0443 BPSL2396 BPSL2396
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL0726Putative membrane protein; No significant database matches. (323 aa)    
Predicted Functional Partners:
BPSL0727
Hypothetical protein; No significant database matches.
 
     0.954
BPSL0728
Similar to Burkholderia cepacia glucose dehydrogenase gdhalphA SWALL:AAN39686 (EMBL:AF430844) (539 aa) fasta scores: E(): 5.8e-30, 29.76% id in 541 aa, and to Xanthomonas axonopodis 2-keto-gluconate dehydrogenase xac2128 SWALL:Q8PKP1 (EMBL:AE011848) (508 aa) fasta scores: E(): 5.4e-62, 41.53% id in 520 aa, and to Halobacterium sp. Vng1035C vng1035C SWALL:Q9HQR8 (EMBL:AE005037) (529 aa) fasta scores: E(): 2.8e-44, 35.97% id in 531 aa.
 
     0.895
BPSL0725
Similar to Pseudomonas putida mandelate racemase mdlA SWALL:MANR_PSEPU (SWALL:P11444) (359 aa) fasta scores: E(): 4.1e-16, 28.42% id in 380 aa, and to Streptomyces coelicolor putative racemase sco7415 or sc6d11.11 SWALL:Q9L144 (EMBL:AL158061) (385 aa) fasta scores: E(): 1.4e-64, 49.04% id in 367 aa, and to Brucella melitensis mandelate racemase bmei1712 SWALL:Q8YF15 (EMBL:AE009605) (372 aa) fasta scores: E(): 2.4e-30, 36% id in 350 aa.
 
     0.832
BPSL0724
Putative thiamine pyrophosphate requiring enzyme; Similar to Pseudomonas aeruginosa probable decarboxylase pa2108 SWALL:Q9I207 (EMBL:AE004638) (590 aa) fasta scores: E(): 6.6e-132, 56.99% id in 593 aa, and to Streptomyces coelicolor putative pyruvate dehydrogenase sco7412 or sc6d11.08 SWALL:Q9L147 (EMBL:AL158061) (600 aa) fasta scores: E(): 2.2e-130, 55.48% id in 593 aa, and to Rhizobium meliloti putative pyruvate oxidase protein rb0095 or smb20095 SWALL:Q92X67 (EMBL:AL603642) (605 aa) fasta scores: E(): 6.3e-69, 40.85% id in 607 aa, and to Methanopyrus kandleri acetolactate synthase, [...]
 
     0.683
BPSL0702
Calcineurin-like phosphoesterase; Similar to Mycobacterium tuberculosis hypothetical protein rv2577 or mt2654 or mtcy227.24C SWALL:YP77_MYCTU (SWALL:Q50644) (529 aa) fasta scores: E(): 1.5e-17, 39.55% id in 579 aa, and to Aspergillus ficuum acid phosphatase precursor aphA SWALL:Q12546 (EMBL:U18553) (614 aa) fasta scores: E(): 1.9e-06, 29.41% id in 204 aa, and to Lupinus albus acid phosphatase SWALL:Q9XJ24 (EMBL:AB023385) (638 aa) fasta scores: E(): 3.4e-06, 25.4% id in 370 aa.
  
     0.570
BPSL1888
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsp1080 or rs02587 SWALL:Q8XQY8 (EMBL:AL646082) (541 aa) fasta scores: E(): 1e-35, 34.76% id in 584 aa, and to Agrobacterium tumefaciens hypothetical protein atu1609 or agr_c_2962 SWALL:Q8UEZ4 (EMBL:AE009118) (579 aa) fasta scores: E(): 3.8e-06, 25.71% id in 599 aa.
  
     0.500
BPSL1120
Similar to Streptomyces coelicolor putative transferase sco6183 or sc2g5.04 SWALL:Q9Z5B9 (EMBL:AL035478) (335 aa) fasta scores: E(): 6.7e-12, 31.41% id in 312 aa, and to Pseudomonas aeruginosa heptosyl transferase I RfaC SWALL:O05195 (EMBL:U70982) (355 aa) fasta scores: E(): 2.8e-10, 28.87% id in 374 aa.
  
     0.485
BPSL1004
Putative exported protein; No significant database matches.
  
     0.483
BPSS0443
Similar to Xanthomonas campestris hypothetical protein xcc2050 SWALL:AAM41339 (EMBL:AE012311) (463 aa) fasta scores: E(): 4.3e-106, 57.7% id in 435 aa, and to Zymomonas mobilis hypothetical 54.0 kDa protein SWALL:Q9RQC9 (EMBL:AF117351) (483 aa) fasta scores: E(): 1.2e-07, 24.41% id in 340 aa.
  
     0.479
BPSL2396
Putative membrane protein; Weakly similar to Synechococcus sp. hypothetical protein see0027 SWALL:AAM82702 (EMBL:AY120853) (316 aa) fasta scores: E(): 0.0072, 27.15% id in 313 aa, and to Chlorobium tepidum hypothetical protein ct1155 SWALL:AAM72388 (EMBL:AE012876) (354 aa) fasta scores: E(): 0.018, 27.35% id in 329 aa.
  
     0.468
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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