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BPSL0728 BPSL0728 BPSL0727 BPSL0727 BPSS1729 BPSS1729 BPSL0726 BPSL0726 BPSS0977 BPSS0977 BPSS0975 BPSS0975 BPSL1440 BPSL1440 BPSS1122 BPSS1122 BPSL0725 BPSL0725 BPSL0720 BPSL0720 BPSS1415 BPSS1415
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL0728Similar to Burkholderia cepacia glucose dehydrogenase gdhalphA SWALL:AAN39686 (EMBL:AF430844) (539 aa) fasta scores: E(): 5.8e-30, 29.76% id in 541 aa, and to Xanthomonas axonopodis 2-keto-gluconate dehydrogenase xac2128 SWALL:Q8PKP1 (EMBL:AE011848) (508 aa) fasta scores: E(): 5.4e-62, 41.53% id in 520 aa, and to Halobacterium sp. Vng1035C vng1035C SWALL:Q9HQR8 (EMBL:AE005037) (529 aa) fasta scores: E(): 2.8e-44, 35.97% id in 531 aa. (532 aa)    
Predicted Functional Partners:
BPSL0727
Hypothetical protein; No significant database matches.
   
 0.926
BPSS1729
Putative transposase (fragment); Probable gene remnant. Similar to the N-terminal regions of Xylella fastidiosa IS1327 transposase Tnp SWALL:Q87BW4 (EMBL:AE012558) (188 aa) fasta scores: E(): 4.3e-05, 40.22% id in 87 aa, and to Pantoea agglomerans IS1327 containing a transposase TnpA SWALL:P94785 (EMBL:X87144) (234 aa) fasta scores: E(): 0.00022, 39.08% id in 87 aa.
   
 
 0.908
BPSL0726
Putative membrane protein; No significant database matches.
 
     0.895
BPSS0977
Similar to Pantoea agglomerans cytochrome c subunit II SWALL:Q9RH53 (EMBL:AF068066) (470 aa) fasta scores: E(): 2.6e-64, 47.29% id in 425 aa, and to Ralstonia solanacearum putative oxidoreductase dehydrogenase rsc0772 or rs05082 SWALL:Q8Y1B8 (EMBL:AL646061) (429 aa) fasta scores: E(): 1.9e-96, 62.91% id in 418 aa. Possible alternative translational start site.
 
 
 0.760
BPSS0975
Conserved hypothetical protein; Similar to Pantoea citrea 2-keto-gluconate dehydrogenase subunit KdgA SWALL:Q9XCR1 (EMBL:AF131202) (189 aa) fasta scores: E(): 0.025, 31.28% id in 163 aa, and to Ralstonia solanacearum putative transmembrane dehydrogenase rsc0770 or rs05084 SWALL:Q8Y1C0 (EMBL:AL646061) (163 aa) fasta scores: E(): 2.1e-31, 59.39% id in 165 aa.
 
 
   0.746
BPSL1440
Putative exported protein; Similar to Ralstonia solanacearum probable ankyrin repeat harboring signal peptide protein rsc1788 or rs04187 SWALL:Q8XYH0 (EMBL:AL646066) (291 aa) fasta scores: E(): 9.2e-29, 45.74% id in 223 aa, and to the N-terminal region of Oryza sativa putative ankyrin osjnba0040e01.26 SWALL:Q9AUW0 (EMBL:AC079887) (252 aa) fasta scores: E(): 3.7e-09, 33% id in 203 aa. Note: Most of the database matches in this CDS are to the N-terminal region of ankyrin-related eukaryotic proteins.
    
 0.721
BPSS1122
Similar to Pseudomonas glumae WD-repeat protein ToxC SWALL:Q8RS37 (EMBL:AB040403) (563 aa) fasta scores: E(): 6.3e-132, 63.74% id in 571 aa, and to Streptomyces coelicolor putative repetative protein sco2692 or scc61a.13 SWALL:Q9KYI0 (EMBL:AL939113) (626 aa) fasta scores: E(): 3.5e-15, 28.92% id in 560 aa, and to Anabaena sp. WD-repeat protein all4834 from codon 950 of Q8YMU3 SWALL:Q8YMU3 (EMBL:AP003597) (1551 aa) fasta scores: E(): 4.3e-13, 24.11% id in 593 aa.
    
 0.715
BPSL0725
Similar to Pseudomonas putida mandelate racemase mdlA SWALL:MANR_PSEPU (SWALL:P11444) (359 aa) fasta scores: E(): 4.1e-16, 28.42% id in 380 aa, and to Streptomyces coelicolor putative racemase sco7415 or sc6d11.11 SWALL:Q9L144 (EMBL:AL158061) (385 aa) fasta scores: E(): 1.4e-64, 49.04% id in 367 aa, and to Brucella melitensis mandelate racemase bmei1712 SWALL:Q8YF15 (EMBL:AE009605) (372 aa) fasta scores: E(): 2.4e-30, 36% id in 350 aa.
 
     0.702
BPSL0720
Similar to Acetobacter polyoxogenes, and Acetobacter europaeus alcohol dehydrogenase cytochrome c subunit precursor adhB SWALL:CYCA_ACEPO (SWALL:Q03318) (468 aa) fasta scores: E(): 2.7e-55, 44.49% id in 418 aa, and to Pseudomonas aeruginosa probable cytochrome c precursor pa2266 SWALL:Q9I1K7 (EMBL:AE004652) (439 aa) fasta scores: E(): 9.6e-56, 45.51% id in 424 aa.
 
 
 0.686
BPSS1415
Putative dehydrogenase/oxidoreductase protein; Similar to Salmonella typhimurium 3-hydroxyisobutyrate dehydrogenase YgbJ or stm2918 SWALL:Q8ZMG4 (EMBL:AE008833) (307 aa) fasta scores: E(): 2.5e-52, 58.07% id in 291 aa, and to Pasteurella multocida hypothetical protein Pm1366 SWALL:Q9CL76 (EMBL:AE006174) (301 aa) fasta scores: E(): 9.3e-52, 55.66% id in 300 aa, and to Brucella melitensis D-beta-hydroxybutyrate dehydrogenase bmeII1090 SWALL:Q8YB11 (EMBL:AE009741) (302 aa) fasta scores: E(): 2.4e-49, 55.4% id in 296 aa.
      
 0.686
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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