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BPSL1003 BPSL1003 speB speB BPSL2388 BPSL2388 BPSL2389 BPSL2389 arcA arcA argH argH BPSL1715 BPSL1715 argH-2 argH-2 BPSL2214 BPSL2214 BPSL1004 BPSL1004 BPSS1151 BPSS1151
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSL1003Putative ornithine decarboxylase; Similar to, although longer in its N-terminal region than, Escherichia coli ornithine decarboxylase, inducible SpeF or b0693 SWALL:DCOS_ECOLI (SWALL:P24169) (732 aa) fasta scores: E(): 4.5e-73, 32.64% id in 680 aa, and to Ralstonia solanacearum probable biodegradative arginine decarboxylase protein rsc2365 or rs01181 SWALL:Q8XWV5 (EMBL:AL646069) (759 aa) fasta scores: E(): 1.1e-198, 79.68% id in 768 aa. (759 aa)    
Predicted Functional Partners:
speB
Agmatinase; Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri agmatinase SpeB or b2937 or z4281 or ecs3812 or sf2927 SWALL:SPEB_ECOLI (SWALL:P16936) (306 aa) fasta scores: E(): 3e-50, 48.03% id in 306 aa, and to Rhizobium loti agmatinase mll8453 SWALL:Q982X2 (EMBL:AP003014) (335 aa) fasta scores: E(): 1.9e-57, 52.42% id in 309 aa; Belongs to the arginase family.
    
 0.924
BPSL2388
Putative arginine N-succinyltransferase, beta chain; Similar to Escherichia coli, and Escherichia coli O157:H7 arginine N-succinyltransferase AstA SWALL:ASTA_ECOLI (SWALL:P76218) (344 aa) fasta scores: E(): 7.4e-60, 46.74% id in 338 aa, and to Pseudomonas aeruginosa arginine N-succinyltransferase, beta chain AruA or pa0897 SWALL:ASTG_PSEAE (SWALL:P80358) (340 aa) fasta scores: E(): 3.9e-53, 42.22% id in 341 aa, and to Pseudomonas aeruginosa arginine N-succinyltransferase, alpha chain AstA or AruF or pa0896 SWALL:ASTA_PSEAE (SWALL:P80357) (338 aa) fasta scores: E(): 2e-39, 37.13% id in [...]
   
 
  0.908
BPSL2389
Similar to Pseudomonas aeruginosa arginine N-succinyltransferase, alpha chain AstA or AruF or pa0896 SWALL:ASTA_PSEAE (SWALL:P80357) (338 aa) fasta scores: E(): 1e-52, 44.34% id in 336 aa, and to Escherichia coli, and Escherichia coli O157:H7 arginine N-succinyltransferase AstA SWALL:ASTA_ECOLI (SWALL:P76218) (344 aa) fasta scores: E(): 1.1e-36, 35.5% id in 338 aa, and to Pseudomonas aeruginosa arginine N-succinyltransferase, beta chain AruG or pa0897 SWALL:ASTG_PSEAE (SWALL:P80358) (340 aa) fasta scores: E(): 2e-36, 36.41% id in 346 aa.
   
 
  0.908
arcA
Arginine deiminase; Similar to Pseudomonas aeruginosa arginine deiminase ArcA or pa5171 SWALL:ARCA_PSEAE (SWALL:P13981) (417 aa) fasta scores: E(): 2.5e-140, 79.36% id in 412 aa, and to Rhizobium etli arginine deiminase ArcA SWALL:ARCA_RHIET (SWALL:O31017) (409 aa) fasta scores: E(): 1.1e-102, 61.42% id in 407 aa.
    
 0.848
argH
Similar to Escherichia coli argininosuccinate lyase ArgH or b3960 SWALL:ARLY_ECOLI (SWALL:P11447) (457 aa) fasta scores: E(): 9.8e-72, 44.97% id in 458 aa, to Pseudomonas aeruginosa argininosuccinate lyase ArgH or pa5263 SWALL:ARLY_PSEAE (SWALL:P50987) (464 aa) fasta scores: E(): 1.5e-110, 64.51% id in 465 aa, and to Ralstonia solanacearum argininosuccinate lyase rsc2363 or rs01183 SWALL:ARLY_RALSO (SWALL:Q8XWV7) (471 aa) fasta scores: E(): 1.5e-143, 82.09% id in 469 aa.
     
 0.817
BPSL1715
Putative bifunctional protein (ligase and argininosuccinate lyase); Similar to full length of Rhizobium loti fusion protein contains putative ligase and probable arginosuccinate lyase msi203 SWALL:CAD31608 (EMBL:AL672113) (899 aa) fasta scores: E(): 5.4e-96, 38.52% id in 911 aa, and C-terminal region similar to Escherichia coli argininosuccinate lyase ArgH or b3960 SWALL:ARLY_ECOLI (SWALL:P11447) (457 aa) fasta scores: E(): 1.2e-25, 32.44% id in 376 aa.
     
 0.817
argH-2
Similar to Escherichia coli argininosuccinate lyase ArgH or b3960 SWALL:ARLY_ECOLI (SWALL:P11447) (457 aa) fasta scores: E(): 7.9e-63, 43.26% id in 453 aa, and to Bacillus subtilis argininosuccinate lyase ArgH SWALL:ARLY_BACSU (SWALL:O34858) (461 aa) fasta scores: E(): 1.8e-70, 44.13% id in 460 aa.
     
 0.817
BPSL2214
Similar to Rhizobium loti fusion protein contains putative ligase and probable arginosuccinate lyase msi203 SWALL:CAD31608 (EMBL:AL672113) (899 aa) fasta scores: E(): 7.9e-99, 38.19% id in 906 aa, N-terminal region to Rhizobium loti putative ligase/carboxylase protein msi201 SWALL:CAD31606 (EMBL:AL672113) (425 aa) fasta scores: E(): 5.4e-25, 31.08% id in 415 aa and C-terminal region to Rhizobium loti argininosuccinate lyase mll9226 SWALL:Q981V0 (EMBL:AP003015) (927 aa) fasta scores: E(): 4.4e-94, 37.19% id in 898 aa.
     
 0.817
BPSL1004
Putative exported protein; No significant database matches.
       0.793
BPSS1151
Similar to Pseudomonas aeruginosa spermidine synthase SpeE or pa1687 SWALL:SPEE_PSEAE (SWALL:Q9X6R0) (286 aa) fasta scores: E(): 1.9e-06, 27.95% id in 254 aa, and to Xanthomonas campestris transferase xcc1548 SWALL:AAM40843 (EMBL:AE012255) (247 aa) fasta scores: E(): 1e-24, 43.19% id in 213 aa, and to Neisseria meningitidis putative transferase nma1087 or nmb0869 SWALL:Q9JQL8 (EMBL:AL162755) (263 aa) fasta scores: E(): 1.7e-20, 34.15% id in 243 aa.
  
  
 0.755
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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