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eco eco BPSL3095 BPSL3095 BPSL1800 BPSL1800 BPSL1801 BPSL1801 BPSL1799 BPSL1799 BPSL1872 BPSL1872 BPSL1053 BPSL1053 BPSL0918 BPSL0918 fbp-2 fbp-2 BPSS0536 BPSS0536 BPSS1352 BPSS1352
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecoEcotin precursor; Similar to Escherichia coli ecotin precursor Eco or Eti or b2209 SWALL:ECOT_ECOLI (SWALL:P23827) (162 aa) fasta scores: E(): 1.2e-20, 44.3% id in 158 aa, and to Pseudomonas aeruginosa ecotin precursor pa2755 SWALL:ECOT_PSEAE (SWALL:Q9I088) (156 aa) fasta scores: E(): 4.2e-25, 51.35% id in 148 aa. (179 aa)    
Predicted Functional Partners:
BPSL3095
Putative membrane protein; Alanine-rich, low complexity protein. No significant database matches.
      
 0.686
BPSL1800
Similar to Escherichia coli outer membrane usher protein PapC precursor SWALL:PAPC_ECOLI (SWALL:P07110) (836 aa) fasta scores: E(): 1e-85, 38.1% id in 824 aa, and to Proteus mirabilis outer membrane usher protein PmfC precursor SWALL:PMFC_PROMI (SWALL:P53514) (828 aa) fasta scores: E(): 1.1e-66, 33.66% id in 799 aa.
  
     0.615
BPSL1801
Similar to Escherichia coli type-1 fimbrial protein, A chain precursor FimA or PilA or b4314 SWALL:FM1A_ECOLI (SWALL:P04128) (182 aa) fasta scores: E(): 3.2e-17, 42.62% id in 183 aa, and to Klebsiella pneumoniae fimbrial subunit type 1 precursor SWALL:FM11_KLEPN (SWALL:P12266) (182 aa) fasta scores: E(): 3.2e-17, 42.62% id in 183 aa.
  
     0.610
BPSL1799
Similar to Escherichia coli O157:H7 putative fimbrial chaperone YfcS or z3599 or ecs3220 SWALL:Q8XCP6 (EMBL:AE005465) (252 aa) fasta scores: E(): 1.2e-32, 39.59% id in 245 aa, and to Proteus mirabilis chaperone protein PmfD precursor WALL:PMFD_PROMI (SWALL:P53520) (254 aa) fasta scores: E(): 4.4e-29, 36.63% id in 232 aa.
  
     0.565
BPSL1872
Similar to Escherichia coli probable N-acetylmuramoyl-L-alanine amidase YbjR or b0867 SWALL:YBJR_ECOLI (SWALL:P75820) (276 aa) fasta scores: E(): 4.4e-49, 52.57% id in 272 aa, and to Salmonella typhi putative N-acetylmuramoyl-L-alanine amidase sty0927 SWALL:Q8Z834 (EMBL:AL627268) (276 aa) fasta scores: E(): 1.6e-45, 49.62% id in 268 aa.
  
     0.512
BPSL1053
Putative membrane protein (fragment); 2 probable transmembrane helices predicted for BPSL1051 by TMHMM2.0 at aa 5-22 and 26-48.
       0.511
BPSL0918
Similar to Escherichia coli, and Escherichia coli O157:H7 FkbP-type peptidyl-prolyl cis-trans isomerase FkpB or SlpA or b0028 or z0033 or ecs0031 SWALL:FKBX_ECOLI (SWALL:P22563) (148 aa) fasta scores: E(): 2.3e-14, 40.55% id in 143 aa, and to Ralstonia solanacearum probable FkbP-type peptidyl-prolyl cis-trans isomerase protein FkpB or rsc2443 or rs01351 SWALL:Q8XWN1 (EMBL:AL646070) (144 aa) fasta scores: E(): 1.4e-38, 71.32% id in 143 aa, and to Pseudomonas fluorescens probable FkbP-type peptidyl-prolyl cis-trans isomerase YaaD SWALL:FKBX_PSEFL (SWALL:P21863) (150 aa) fasta scores: E() [...]
      
 0.471
fbp-2
Similar to Neisseria meningitidis peptidyl-prolyl cis-trans isomerase Fbp or nmb0027 SWALL:FKBP_NEIMB (SWALL:P25138) (109 aa) fasta scores: E(): 2.6e-24, 66.66% id in 105 aa, and to Neurospora crassa FK506-binding protein 9g6.180 SWALL:FKBP_NEUCR (SWALL:P20080) (120 aa) fasta scores: E(): 1.3e-19, 53.5% id in 114 aa.
      
 0.470
BPSS0536
Putative 3-hydroxydecanoyl-ACP:CoA transacylase; Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 subunit A RhlA SWALL:RHLA_PSEAE (SWALL:Q51559) (295 aa) fasta scores: E(): 4e-45, 48.49% id in 266 aa, and to Pseudomonas putida (R)-3-hydroxydecanoyl-ACP:CoA transacylase PhaG SWALL:PHAG_PSEPU (SWALL:O85207) (295 aa) fasta scores: E(): 8.2e-42, 42.64% id in 272 aa. Almost identical to BPSS1352, 99.666% identity (99.666% ungapped) in 299 aa overlap.
  
     0.429
BPSS1352
Putative fatty acid biosynthetic protein; Similar to Pseudomonas aeruginosa rhamnosyltransferase 1 subunit A RhlA or pa3479 SWALL:RHLA_PSEAE (SWALL:Q51559) (295 aa) fasta scores: E(): 2.7e-45, 48.49% id in 266 aa, and to Pseudomonas aeruginosa 3- hydroxyacyl-CoA-acyl carrier protein transferase PhaG or Qin or pa0730 SWALL:PHAG_PSEAE (SWALL:Q51553) (300 aa) fasta scores: E(): 2.4e-43, 43.11% id in 276 aa, and to Pseudomonas putida 3- hydroxyacyl-CoA-acyl carrier protein transferase PhaG SWALL:PHAG_PSEPU (SWALL:O85207) (295 aa) fasta scores: E(): 3.5e-42, 43.01% id in 272 aa.
  
     0.429
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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