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BPSL1125 BPSL1125 BPSL2644 BPSL2644 BPSL2395 BPSL2395 BPSL2193 BPSL2193 argC argC BPSL1204 BPSL1204 BPSL3403 BPSL3403 BPSS0802 BPSS0802 BPSL0115 BPSL0115 BPSS1107 BPSS1107 BPSS2064 BPSS2064
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL1125Putative exported protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0815 or rs05007 SWALL:Q8Y175 (EMBL:AL646061) (132 aa) fasta scores: E(): 1.5e-17, 47.72% id in 132 aa, and to Rhizobium meliloti hypothetical transmembrane signal peptide protein r01916 or smc04246 SWALL:Q92K77 (EMBL:AL591788) (126 aa) fasta scores: E(): 1.1e-05, 36.66% id in 120 aa. (126 aa)    
Predicted Functional Partners:
BPSL2644
Putative exported protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc0700 or rs01605 SWALL:Q8Y1J0 (EMBL:AL646060) (204 aa) fasta scores: E(): 1.3e-26, 46.39% id in 194 aa.
  
     0.602
BPSL2395
Putative lipoprotein; Similar to Ralstonia solanacearum probable lipoprotein rsc2382 or rs01163 SWALL:Q8XWT8 (EMBL:AL646069) (180 aa) fasta scores: E(): 3.6e-28, 47.97% id in 173 aa. N-terminus is similar to the N-terminal region of Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor acrA or MtcA or Lir SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 0.12, 30.15% id in 126 aa.
 
    0.579
BPSL2193
Similar to Ralstonia solanacearum hypothetical protein rsc1355 or rs04637 SWALL:Q8XZP0 (EMBL:AL646064) (137 aa) fasta scores: E(): 1.1e-22, 54.96% id in 131 aa, and to Sulfolobus solfataricus hypothetical protein sso2192 SWALL:Q97WM2 (EMBL:AE006825) (276 aa) fasta scores: E(): 1.9e-09, 36.92% id in 130 aa.
  
     0.560
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
  
   
 0.531
BPSL1204
Putative lipoprotein; Similar to Ralstonia solanacearum probable lipoprotein transmembrane rsc1480 or rs03826 SWALL:Q8XZC1 (EMBL:AL646064) (177 aa) fasta scores: E(): 7.6e-32, 54.32% id in 162 aa, and to Ralstonia solanacearum probable transmembrane protein rsc2071 or rs03636 SWALL:Q8XXP2 (EMBL:AL646068) (173 aa) fasta scores: E(): 6.8e-26, 48.07% id in 156 aa.
 
    0.508
BPSL3403
Putative ATP synthase protein I AtpI; Note possible downstream alternative start codons. Full length similarity to Ralstonia solanacearum hypothetical transmembrane protein Rsc3324 or Rs02554 SWALL:Q8XU69 (EMBL:AL646074) (190 aa) fasta scores: E(): 5.1e-17, 39.34% id in 183 aa. N-terminally truncated version similar to Pseudomonas aeruginosa ATP synthase protein I AtpI or Pa5561 SWALL:Q9HT13 (EMBL:AE004967) (126 aa) fasta scores: E(): 3.9e-06, 36.2% id in 116 aa.
  
     0.480
BPSS0802
Putative extracellular ligand binding protein; Similar to Pseudomonas aeruginosa leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor BraC SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): 8.7e-34, 33.6% id in 369 aa, and to Ralstonia solanacearum putative amino-acid transport signal peptide protein rsc3300 or rs02529 SWALL:Q8XU93 (EMBL:AL646074) (377 aa) fasta scores: E(): 1.6e-60, 49.31% id in 367 aa. Similar to BPSL3284, 88.421% identity (88.421% ungapped) in 380 aa overlap.
      
 0.471
BPSL0115
Patatin-like phospholipase family protein; Poor database matches. Similar to Ralstonia solanacearum hypothetical protein rsc0013 or rs01835 SWALL:Q8Y3G7 (EMBL:AL646057) (297 aa) fasta scores: E(): 1.2e-82, 70.77% id in 284 aa, and to the C-terminal region of Caulobacter crescentus hypothetical protein CC3383 SWALL:Q9A323 (EMBL:AE005999) (353 aa) fasta scores: E(): 0.6, 24.21% id in 256 aa.
  
     0.469
BPSS1107
Hypothetical protein; No significant database matches.
      
 0.449
BPSS2064
Putative porin protein; Similar to Comamonas acidovorans outer membrane porin protein 32 precursor omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 6.7e-16, 28.64% id in 370 aa, and to Ralstonia solanacearum putative porin signal peptide protein rsc2760 or rs00094 SWALL:Q8XVR9 (EMBL:AL646071) (353 aa) fasta scores: E(): 5.9e-46, 42.12% id in 349 aa. Similar to BPSL1029, 65.565% identity (66.854% ungapped) in 363 aa overlap.
  
     0.439
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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