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BPSL1445 BPSL1445 BPSL2110 BPSL2110 BPSS2216 BPSS2216 wcbA wcbA BPSS2217 BPSS2217 wcbD wcbD lpw206-207 lpw206-207 BPSL0619 BPSL0619 BPSL1446 BPSL1446 BPSS1831 BPSS1831 BPSS2282 BPSS2282
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
BPSL1445Putative lipoprotein; Similar to Ralstonia solanacearum putative lipoprotein rsc1878 or rs03438 SWALL:Q8XY85 (EMBL:AL646067) (200 aa) fasta scores: E(): 1.8e-34, 54.54% id in 198 aa, and to Xanthomonas axonopodis hypothetical protein xac4219 SWALL:AAM39054 (EMBL:AE012074) (301 aa) fasta scores: E(): 6.1e-06, 32.3% id in 130 aa. (195 aa)    
Predicted Functional Partners:
BPSL2110
Similar to Ralstonia solanacearum hypothetical protein rsp1175 or rs05065 SWALL:Q8XQP6 (EMBL:AL646083) (83 aa) fasta scores: E(): 1.2e-14, 58.82% id in 68 aa, and to Pseudomonas aeruginosa hypothetical protein pa0038 SWALL:Q9I794 (EMBL:AE004443) (71 aa) fasta scores: E(): 5.2e-14, 60.29% id in 68 aa.
  
    0.511
BPSS2216
Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein RS02225 SWALL:Q8XPH4 (EMBL:AL646086) (72 aa) fasta scores: E(): 2.1e-11, 74.13% id in 58 aa, and to Bordetella pertussis putative membrane protein SWALL:Q7VXL6 (EMBL:BX640416) (53 aa) fasta scores: E(): 4.3e-10, 69.81% id in 53 aa. Possible alternative translational start site after codon 16.
   
    0.495
wcbA
Similar to Escherichia coli capsule polysaccharide export protein KpsC SWALL:KSC5_ECOLI (SWALL:P42217) (675 aa) fasta scores: E(): 4.4e-65, 35.75% id in 674 aa, and to Burkholderia mallei putative capsular polysaccharide export protein WcbA SWALL:Q9AI50 (EMBL:AF285636) (671 aa) fasta scores: E(): 0, 99.85% id in 671 aa, and to previously sequenced Burkholderia pseudomallei putative capsular polysaccharide export protein WcbA SWALL:Q93UK2 (EMBL:AF228583) (671 aa) fasta scores: E(): 0, 99.4% id in 671 aa, and to Burkholderia thailandensis putative capsular polysaccharide export protein W [...]
  
    0.478
BPSS2217
Similar to Rhizobium loti hypothetical protein msr0042 SWALL:Q98NP7 (EMBL:AP002994) (62 aa) fasta scores: E(): 5.3e-11, 68.85% id in 61 aa, and to Brucella melitensis hypothetical cytosolic protein bmei1136 SWALL:Q8YGM2 (EMBL:AE009553) (65 aa) fasta scores: E(): 2.7e-10, 68.33% id in 60 aa.
   
  
 0.467
wcbD
Similar to Haemophilus influenzae capsule polysaccharide export inner-membrane protein BexC SWALL:BEXC_HAEIN (SWALL:P22930) (377 aa) fasta scores: E(): 7.1e-55, 41.99% id in 381 aa. Identical to Burkholderia mallei putative capsule polysaccharide export inner-membrane protein WcbD SWALL:Q9AI47 (EMBL:AF285636) (382 aa) fasta scores: E(): 3.7e-135, 100% id in 382 aa.
   
    0.446
lpw206-207
Paraquat-inducible protein; Identical to previously sequenced Burkholderia pseudomallei paraquat-inducible protein Lpw206-207 SWALL:Q93M60 (EMBL:AY027530) (553 aa) fasta scores: E(): 2.9e-200, 99.81% id in 553 aa, and to Escherichia coli paraquat-inducible protein B PqiB or Pqi5B or b0951 SWALL:PQIB_ECOLI (SWALL:P43671) (546 aa) fasta scores: E(): 2.5e-48, 33.72% id in 507 aa.
  
     0.429
BPSL0619
Similar to Vibrio vulnificus capsular polysaccharide transport protein Wza SWALL:Q938A5 (EMBL:AY055488) (378 aa) fasta scores: E(): 1.4e-22, 33.9% id in 407 aa, and to Ralstonia solanacearum EPSI polysaccharide export outer membrane protein EpsA SWALL:EPA1_RALSO (SWALL:P58597) (381 aa) fasta scores: E(): 1.3e-20, 34.65% id in 404 aa.
  
    0.427
BPSL1446
Putative membrane protein; No significant database matches. C-terminal region with high content in proline residues.
       0.427
BPSS1831
Putative exopolysaccharide (EPS) biosynthesis related polysaccharide lipoprotein; Similar to Erwinia amylovora amylovoran export outer membrane protein AmsH precursor SWALL:AMSH_ERWAM (SWALL:Q46629) (377 aa) fasta scores: E(): 1.3e-34, 38.36% id in 391 aa, and to Escherichia coli, and Escherichia coli O157:H7 putative polysaccharide export protein Wza precursor b2062 or z3227 or ecs2867 SWALL:WZA_ECOLI (SWALL:P76388) (379 aa) fasta scores: E(): 7.2e-34, 36.45% id in 395 aa, and to Vibrio vulnificus capsular polysaccharide transport protein Wza SWALL:Q938A5 (EMBL:AY055488) (378 aa) fast [...]
  
    0.424
BPSS2282
Similar to Ralstonia solanacearum hypothetical protein rsc0195 or rs00627 SWALL:Q8Y2Y6 (EMBL:AL646058) (617 aa) fasta scores: E(): 5.8e-101, 50.6% id in 581 aa. C-terminus is similar to the N-terminal region of Thermoanaerobacter tengcongensis ribonucleotide reductase alpha subunit tte2336 SWALL:Q8R7R2 (EMBL:AE013176) (691 aa) fasta scores: E(): 7.8e-32, 30% id in 570 aa.
  
     0.409
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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