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BPSL1504 BPSL1504 surE surE rpoS rpoS pcm-2 pcm-2 BPSL1506 BPSL1506 BPSS0238 BPSS0238 lepB lepB mrcA mrcA BPSL2104 BPSL2104 BPSL1501 BPSL1501 BPSL0262 BPSL0262
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSL1504Subfamily M23B unassigned peptidase; Similar to full length of Rhodocyclus gelatinosus NlpD protein SWALL:Q9JP90 (EMBL:AB034704) (314 aa) fasta scores: E(): 5.3e-38, 51.91% id in 314 aa, and to C-terminal region of Escherichia coli lipoprotein NlpD precursor or b2742 SWALL:NLPD_ECOLI (SWALL:P33648) (379 aa) fasta scores: E(): 1.3e-18, 42.57% id in 256 aa. (298 aa)    
Predicted Functional Partners:
surE
Acid phosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
 
  
 0.856
rpoS
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.
  
  
 0.848
pcm-2
Putative L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
     
 0.834
BPSL1506
Similar to Neisseria meningitidis hypothetical protein nma1628 SWALL:Q9JTU6 (EMBL:AL162756) (264 aa) fasta scores: E(): 6.1e-65, 61.21% id in 263 aa, and to Campylobacter jejuni hypothetical protein cj1132C SWALL:Q9PNG2 (EMBL:AL139077) (264 aa) fasta scores: E(): 1.3e-26, 35.56% id in 239 aa.
       0.787
BPSS0238
Similar to Bacillus subtilis penicillin-binding protein 1A/1B PonA SWALL:PBPA_BACSU (SWALL:P39793) (914 aa) fasta scores: E(): 8.7e-44, 30.94% id in 685 aa, and to Escherichia coli penicillin-binding protein 1B MrcB or PonB or PbpF or b0149 SWALL:PBPB_ECOLI (SWALL:P02919) (844 aa) fasta scores: E(): 9.3e-43, 31.98% id in 591 aa.
 
   
 0.581
lepB
Similar to Escherichia coli signal peptidase I LepB SWALL:LEP_ECOLI (SWALL:P00803) (324 aa) fasta scores: E(): 4.5e-22, 43.43% id in 320 aa, and to Ralstonia solanacearum probable signal peptidase I rsc1061 or rs04147 SWALL:Q8Y0I3 (EMBL:AL646062) (305 aa) fasta scores: E(): 6.2e-77, 64.05% id in 306 aa; Belongs to the peptidase S26 family.
 
  
 0.567
mrcA
Similar to Escherichia coli penicillin-binding protein 1A MrcA or PonA or b3396 SWALL:PBPA_ECOLI (SWALL:P02918) (850 aa) fasta scores: E(): 1.9e-88, 38.63% id in 818 aa.
 
   
 0.565
BPSL2104
Putative penicillin-binding protein; Similar to Ralstonia solanacearum probable penicillin-binding 1 rsc2976 or rs01357 SWALL:Q8XV55 (EMBL:AL646073) (801 aa) fasta scores: E(): 2.2e-183, 61.61% id in 805 aa, and to Neisseria lactamica penicillin-binding protein 1A MrcA or PonA SWALL:PBPA_NEILA (SWALL:O87579) (798 aa) fasta scores: E(): 4.3e-129, 47.4% id in 791 aa. Note: This CDS is longer in its N-terminal region than most of its database matches.
 
   
 0.547
BPSL1501
Putative transferase; Similar to Pseudomonas aeruginosa hypothetical protein pa3733 SWALL:Q9HXQ9 (EMBL:AE004792) (409 aa) fasta scores: E(): 4.9e-99, 65.92% id in 402 aa, to Caulobacter crescentus hypothetical protein cc3562 SWALL:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 6.6e-76, 52.67% id in 393 aa, and to Escherichia coli crotonobetainyl-CoA:carnitine CoA-transferase CaiB or b0038 SWALL:CAIB_ECOLI (SWALL:P31572) (405 aa) fasta scores: E(): 9.8e-28, 29.52% id in 403 aa.
       0.530
BPSL0262
Putative transglycosylase; Similar to Escherichia coli soluble lytic murein transglycosylase precursor Slt or SltY SWALL:SLT_ECOLI (SWALL:P03810) (645 aa) fasta scores: E(): 5.8e-31, 27.49% id in 662 aa, and to Ralstonia solanacearum probable soluble lytic murein transglycosylase precursor transmembrane protein rsc0088 or rs02278 SWALL:Q8Y392 (EMBL:AL646057) (650 aa) fasta scores: E(): 9.4e-96, 57.01% id in 656 aa.
 
   
 0.469
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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