STRINGSTRING
bamB bamB bamA bamA surA surA bamD bamD omlA omlA BPSL1515 BPSL1515 BPSS0632 BPSS0632 BPSL3108 BPSL3108 BPSL2257 BPSL2257 BPSL1933 BPSL1933 der der
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bamBConserved hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (381 aa)    
Predicted Functional Partners:
bamA
Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
 
 0.978
surA
Putative peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.
  
 
 0.967
bamD
Putative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
 
 0.948
omlA
Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.942
BPSL1515
Putative membrane protein; Similar to Ralstonia solanacearum hypothetical transmembrane protein rsc1217 or rs02712 SWALL:Q8Y028 (EMBL:AL646063) (211 aa) fasta scores: E(): 2e-49, 67.61% id in 210 aa, and to Neisseria gonorrhoeae hypothetical 23.1 kDa protein in engA 5'region SWALL:YENG_NEIGO (SWALL:O87406) (209 aa) fasta scores: E(): 2.4e-13, 31.92% id in 213 aa.
 
  
 0.936
BPSS0632
Patatin-like phospholipase; Similar to Pseudomonas aeruginosa hypothetical protein pa3339 SWALL:Q9HYQ6 (EMBL:AE004756) (728 aa) fasta scores: E(): 6.6e-53, 34.01% id in 729 aa, and to Vibrio cholerae hypothetical protein vc0603 SWALL:Q9KUB9 (EMBL:AE004145) (764 aa) fasta scores: E(): 7.6e-43, 32.18% id in 755 aa. Possible alternative translational start site.
  
 
 0.888
BPSL3108
Putative lipoprotein; Similar to Ralstonia solanacearum putative lipoprotein Rsp0742 or Rs01966 SWALL:Q8XRT9 (EMBL:AL646080) (215 aa) fasta scores: E(): 4.6e-27, 53.36% id in 223 aa.
   
 
 0.834
BPSL2257
Similar to Escherichia coli lipoprotein-34 precursor NlpB or DapX SWALL:NLPB_ECOLI (SWALL:P21167) (344 aa) fasta scores: E(): 0.11, 23.29% id in 395 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1146 or rs04607 SWALL:Q8Y098 (EMBL:AL646062) (398 aa) fasta scores: E(): 4.9e-35, 42.21% id in 398 aa.
  
 
 0.822
BPSL1933
Putative exported protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc1146 or rs04607 SWALL:Q8Y098 (EMBL:AL646062) (398 aa) fasta scores: E(): 1e-27, 38.98% id in 395 aa, and to Neisseria meningitidis hypothetical protein nmb0928 SWALL:Q9JZR5 (EMBL:AE002444) (398 aa) fasta scores: E(): 9.5e-23, 30.93% id in 417 aa.
  
 
 0.819
der
Putative GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.781
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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