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BPSL1554 BPSL1554 BPSS1855 BPSS1855 BPSS0278 BPSS0278 BPSS1744 BPSS1744 BPSL0247 BPSL0247 BPSL0822 BPSL0822 BPSL1782 BPSL1782 BPSS0369 BPSS0369 bfr bfr fumC fumC BPSS0495 BPSS0495
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSL1554Putative metal-ion transport system, membrane protein; Similar to Escherichia coli, and Escherichia coli O157:H7 manganese transport protein MntH or b2392 or z3658 or ecs3271 SWALL:MNTH_ECOLI (SWALL:P77145) (412 aa) fasta scores: E(): 1.6e-41, 37.82% id in 423 aa, and to Pseudomonas aeruginosa manganese transport protein pa0809 SWALL:MNT2_PSEAE (SWALL:Q9RPF2) (438 aa) fasta scores: E(): 6.3e-73, 51.28% id in 427 aa. (435 aa)    
Predicted Functional Partners:
BPSS1855
Phosphoglycerate mutase family protein; Similar to Pseudomonas aeruginosa hypothetical protein pa1831 SWALL:Q9I2R4 (EMBL:AE004609) (236 aa) fasta scores: E(): 1.9e-19, 33.89% id in 236 aa.
     
 0.588
BPSS0278
Putative oxygenase; Low similarity to Pseudomonas sp. vanillate O-demethylase oxygenase subunit VanA SWALL:VANA_PSESP (SWALL:O05616) (354 aa) fasta scores: E(): 1.9e-06, 24.49% id in 298 aa, and to Xanthomonas campestris vanillate O-demethylase oxygenase subunit xcc0363 SWALL:AAM39682 (EMBL:AE012132) (358 aa) fasta scores: E(): 1.7e-08, 25.98% id in 304 aa.
      
 0.580
BPSS1744
Putative cytochrome b561; Similar to Escherichia coli, and Shigella flexneri cytochrome b561 CybB or b1418 or sf1794 SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 5e-16, 34.7% id in 170 aa, and to Pseudomonas aeruginosa cytochrome b561 pa0918 SWALL:Q9I539 (EMBL:AE004526) (182 aa) fasta scores: E(): 1.9e-22, 41.86% id in 172 aa.
      
 0.576
BPSL0247
Putative iron-sulfur protein; Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria; Belongs to the high-potential iron-sulfur protein (HiPIP) family.
      
 0.570
BPSL0822
Similar to Mycobacterium leprae putative ABC-transporter transmembrane protein ml0335 SWALL:Q9CCW1 (EMBL:AL583918) (286 aa) fasta scores: E(): 6.6e-22, 35.63% id in 261 aa, and to Thermoanaerobacter tengcongensis ABC-type Mn2+/Zn2+ transport systems, permease components znuB or tte0361 SWALL:Q8RCQ5 (EMBL:AE013009) (263 aa) fasta scores: E(): 2.3e-20, 32.03% id in 256 aa.
   
  
 0.523
BPSL1782
Putative iron transport-related membrane protein; Similar to Escherichia coli ferric iron reductase protein FhuF or b4367 SWALL:FHUF_ECOLI (SWALL:P39405) (262 aa) fasta scores: E(): 4.7e-06, 27.27% id in 242 aa, and to Rhizobium meliloti putative transport protein r02270 or smc01658 SWALL:Q92ND8 (EMBL:AL591790) (243 aa) fasta scores: E(): 1.2e-06, 27.31% id in 238 aa.
   
  
 0.515
BPSS0369
Putative bacterioferritin ferredoxin protein; Similar to Escherichia coli, and Escherichia coli O6 bacterioferritin-associated ferredoxin Bfd or b3337 or c4108 SWALL:BFD_ECOLI (SWALL:P13655) (64 aa) fasta scores: E(): 0.002, 35.84% id in 53 aa, and to Ralstonia solanacearum putative bacterioferritin-associated ferredoxin protein rsc0349 or rs03316 SWALL:Q8Y2I7 (EMBL:AL646058) (91 aa) fasta scores: E(): 6.3e-07, 45.45% id in 55 aa. CDS is extended at the C-terminus in comparison to orthologues.
   
  
 0.501
bfr
Bacterioferritin; Iron-storage protein.
      
 0.491
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
      
 0.480
BPSS0495
Nitroreductase family protein; Similar to Pseudomonas aeruginosa hypothetical protein pa3208 SWALL:Q9HZ32 (EMBL:AE004744) (186 aa) fasta scores: E(): 9.9e-25, 43.71% id in 183 aa, and to Escherichia coli, and Escherichia coli O157:H7 protein YdjA or b1765 or z2798 or ecs2471 SWALL:YDJA_ECOLI (SWALL:P24250) (183 aa) fasta scores: E(): 7.8e-18, 39.08% id in 174 aa. Note: This CDS is longer in its N-terminal region than most of its database matches.
      
 0.479
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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