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BPSL1740 BPSL1740 BPSL1737 BPSL1737 BPSL1739 BPSL1739 BPSL1738 BPSL1738 BPSS1426 BPSS1426 BPSS0556 BPSS0556
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL1740Similar to Rhizobium loti ABC transporter, permease protein mlr8416 SWALL:Q983A4 (EMBL:AP003014) (249 aa) fasta scores: E(): 1.2e-46, 61.6% id in 237 aa, and to Yersinia pestis putative ABC transport integral membrane subunit ypo1199 SWALL:Q8ZGT0 (EMBL:AJ414147) (278 aa) fasta scores: E(): 5.9e-29, 49.32% id in 223 aa. Note: this CDS is longer in its N-terminal region than most of its database matches. (272 aa)    
Predicted Functional Partners:
BPSL1737
Putative ABC transport system, exported protein; Similar to Brucella melitensis glycine betaine-binding protein precursor bmei1725 SWALL:Q8YF02 (EMBL:AE009606) (304 aa) fasta scores: E(): 1.3e-70, 64.35% id in 303 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu0199 or agr_c_337 SWALL:Q8UIU3 (EMBL:AE008993) (303 aa) fasta scores: E(): 3.7e-68, 63.48% id in 304 aa.
 
 0.999
BPSL1739
Similar to Rhizobium meliloti putative choline uptake ABC transporter ATP-binding protein rb0812 or smb21146 SWALL:Q92V97 (EMBL:AL603645) (312 aa) fasta scores: E(): 2e-61, 61.93% id in 310 aa, and to Escherichia coli hypothetical ABC transporter ATP-binding protein YehX or b2129 SWALL:YEHX_ECOLI (SWALL:P33360) (308 aa) fasta scores: E(): 6.3e-44, 48.54% id in 309 aa.
 0.998
BPSL1738
Similar to Rhizobium loti ABC transporter, permease protein mlr8414 SWALL:Q983A6 (EMBL:AP003014) (387 aa) fasta scores: E(): 1.5e-64, 52.63% id in 380 aa, and to Brucella melitensis glycine betaine/L-proline transport system permease protein bmei1726 SWALL:Q8YF01 (EMBL:AE009606) (386 aa) fasta scores: E(): 4.9e-58, 50.65% id in 381 aa.
 
 
 
0.989
BPSS1426
Similar to Salmonella typhimurium glycine betaine/L-proline transport ATP-binding protein ProV or stm2809 SWALL:PROV_SALTY (SWALL:P17328) (400 aa) fasta scores: E(): 2.3e-57, 46.73% id in 398 aa, and to Ralstonia solanacearum putative glycine betaine/L-proline ATP-binding ABC transporter protein OpuA or rsp0066 or rs02041 SWALL:Q8XTP0 (EMBL:AL646076) (385 aa) fasta scores: E(): 2.3e-106, 82.26% id in 389 aa, and to Brucella melitensis glycine betaine/L-proline transport ATP-binding protein ProV bmeii0548 SWALL:Q8YCI0 (EMBL:AE009690) (398 aa) fasta scores: E(): 4.7e-63, 50.51% id in 392 aa.
  
 0.564
BPSS0556
Putative exported protein; Similar to Ralstonia solanacearum putative glycine betaine transmembrane and periplasmic ABC transporter protein rsp0064 or rs02039 SWALL:Q8XTP2 (EMBL:AL646076) (289 aa) fasta scores: E(): 1.3e-89, 80.56% id in 283 aa. C-terminal region is similar to the N-terminal region of Bacillus subtilis glycine betaine-binding protein precursor opuaC SWALL:OPAC_BACSU (SWALL:P46922) (293 aa) fasta scores: E(): 2.9e-21, 38.63% id in 176 aa.
 
  
 0.400
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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