STRINGSTRING
BPSL1798 BPSL1798 BPSL1799 BPSL1799 BPSL1800 BPSL1800 BPSS0175 BPSS0175 BPSS1434 BPSS1434 BPSL1893 BPSL1893
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL1798Putative exported protein; Similar to Pseudomonas aeruginosa hypothetical protein pa0498 SWALL:Q9I620 (EMBL:AE004487) (335 aa) fasta scores: E(): 1.1e-13, 23.79% id in 332 aa, and to Yersinia pestis putative exported protein ypo4040 SWALL:Q8Z9Y9 (EMBL:AJ414160) (328 aa) fasta scores: E(): 2.2e-10, 28.4% id in 345 aa. (341 aa)    
Predicted Functional Partners:
BPSL1799
Similar to Escherichia coli O157:H7 putative fimbrial chaperone YfcS or z3599 or ecs3220 SWALL:Q8XCP6 (EMBL:AE005465) (252 aa) fasta scores: E(): 1.2e-32, 39.59% id in 245 aa, and to Proteus mirabilis chaperone protein PmfD precursor WALL:PMFD_PROMI (SWALL:P53520) (254 aa) fasta scores: E(): 4.4e-29, 36.63% id in 232 aa.
  
 
 0.840
BPSL1800
Similar to Escherichia coli outer membrane usher protein PapC precursor SWALL:PAPC_ECOLI (SWALL:P07110) (836 aa) fasta scores: E(): 1e-85, 38.1% id in 824 aa, and to Proteus mirabilis outer membrane usher protein PmfC precursor SWALL:PMFC_PROMI (SWALL:P53514) (828 aa) fasta scores: E(): 1.1e-66, 33.66% id in 799 aa.
  
 
 0.657
BPSS0175
Hypothetical protein; No significant database matches.
      
 0.495
BPSS1434
Similar to C-terminus of Streptococcus pneumoniae cell wall surface anchor family protein sp1772 SWALL:Q97P71 (EMBL:AE007470) (4776 aa) fasta scores: E(): 1.2e-132, 37.46% id in 2565 aa, and to C-terminus of Streptococcus cristatus SrpA SWALL:Q9KX33 (EMBL:U96166) (3381 aa) fasta scores: E(): 8.9e-115, 32.07% id in 2703 aa, and to C-terminus of Streptococcus gordonii streptococcal hemagglutinin Hsa SWALL:Q9KWR3 (EMBL:AB029393) (2178 aa) fasta scores: E(): 1.5e-88, 35.24% id in 2105 aa.
      
 0.491
BPSL1893
Putative type II/IV secretion system ATP-binding protein; Similar to Ralstonia solanacearum probable secretion ATPase protein CpaF2 or rsp1085 or rs02592 SWALL:Q8XQY3 (EMBL:AL646082) (450 aa) fasta scores: E(): 7.2e-134, 78.54% id in 452 aa, and to Agrobacterium tumefaciens component of type IV pilus CtpG or atu0218 or agr_c_373 SWALL:Q8UIS4 (EMBL:AE008995) (491 aa) fasta scores: E(): 6.2e-62, 42.48% id in 426 aa.
      
 0.404
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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