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BPSL1906 BPSL1906 sdhA sdhA sdhB sdhB sdhB-2 sdhB-2 odhL odhL BPSS1720 BPSS1720 BPSL1961 BPSL1961 BPSS1719 BPSS1719 sucA sucA sucB sucB BPSL1905 BPSL1905
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Textmining
[Homology]
Score
BPSL1906Similar to Ralstonia solanacearum hypothetical protein rsc1272 or rs02810 SWALL:Q8XZX3 (EMBL:AL646063) (365 aa) fasta scores: E(): 1.1e-121, 80% id in 365 aa, and to Neisseria meningitidis putative nucleotide-binding protein nma1520 or nmb1306 SWALL:Q9JRK2 (EMBL:AL162756) (383 aa) fasta scores: E(): 1.7e-64, 47.72% id in 352 aa. (365 aa)    
Predicted Functional Partners:
sdhA
Succinate dehydrogenase flavoprotein subunit; Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 succinate dehydrogenase flavoprotein subunit SdhA or b0723 or c0801 or z0877 or ecs0748 SWALL:DHSA_ECOLI (SWALL:P10444) (588 aa) fasta scores: E(): 7.9e-127, 55.46% id in 586 aa, and to Ralstonia solanacearum putative succinate dehydrogenase SdhA or rsc1994 or rs03562 SWALL:Q8XXW9 (EMBL:AL646067) (592 aa) fasta scores: E(): 6.1e-201, 85.3% id in 592 aa; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
    0.750
sdhB
Similar to Escherichia coli succinate dehydrogenase iron-sulfur protein SdhB or b0724 SWALL:DHSB_ECOLI (SWALL:P07014) (238 aa) fasta scores: E(): 5.9e-65, 66.81% id in 232 aa, and to Ralstonia solanacearum putative succinate dehydrogenase rsc1993 or rs03561 SWALL:Q8XXX0 (EMBL:AL646067) (233 aa) fasta scores: E(): 5.5e-89, 90.51% id in 232 aa; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
    0.735
sdhB-2
Similar to Escherichia coli succinate dehydrogenase iron-sulfur protein SdhB SWALL:DHSB_ECOLI (SWALL:P07014) (238 aa) fasta scores: E(): 3.3e-63, 63.79% id in 232 aa, and to Ralstonia solanacearum putative succinate dehydrogenase rsc1993 or rs03561 SWALL:Q8XXX0 (EMBL:AL646067) (233 aa) fasta scores: E(): 1.7e-74, 73.16% id in 231 aa. Similar to BPSS1717, 74.459% identity (74.783% ungapped) in 231 aa overlap.
 
    0.731
odhL
Similar to Alcaligenes eutrophus dihydrolipoamide dehydrogenase OdhL SWALL:DLDH_ALCEU (SWALL:P52992) (474 aa) fasta scores: E(): 9.7e-132, 76.93% id in 477 aa, and to Ralstonia solanacearum probable dihydrolipoamide dehydrogenase rsc1271 or rs02809 SWALL:Q8XZX4 (EMBL:AL646063) (478 aa) fasta scores: E(): 2.9e-134, 77.35% id in 477 aa.
 
    0.628
BPSS1720
Similar to Ralstonia solanacearum putative transmembrane succinate dehydrogenase SdhC or rsc1996 or rs03564 SWALL:Q8XXW7 (EMBL:AL646067) (140 aa) fasta scores: E(): 1.1e-30, 58.69% id in 138 aa, and to Escherichia coli, and Escherichia coli O157:H7 succinate dehydrogenase cytochrome b-556 subunit SdhC or CybA or b0721 or z0875 or ecs0746 SWALL:DHSC_ECOLI (SWALL:P10446) (129 aa) fasta scores: E(): 7.3e-11, 35.15% id in 128 aa.
 
   
 0.602
BPSL1961
Putative electron transport protein; Accepts electrons from ETF and reduces ubiquinone.
 
     0.577
BPSS1719
Putative succinate dehydrogenase; Similar to Ralstonia solanacearum putative transmembrane succinate dehydrogenase sdhd or rsc1995 or rs03563 SWALL:Q8XXW8 (EMBL:AL646067) (121 aa) fasta scores: E(): 1.2e-35, 71.31% id in 122 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri succinate dehydrogenase hydrophobic membrane anchor protein sdhd or b0722 or c0800 or sf0575 SWALL:DHSD_ECOLI (SWALL:P10445) (115 aa) fasta scores: E(): 1.7e-10, 32.69% id in 104 aa.
 
     0.570
sucA
2-oxoglutarate dehydrogenase E1 component; Similar to Escherichia coli, and Escherichia coli O157:H7 2-oxoglutarate dehydrogenase E1 component SucA or b0726 or z0880 or ecs0751 SWALL:ODO1_ECOLI (SWALL:P07015) (933 aa) fasta scores: E(): 1.8e-205, 55.07% id in 946 aa, and to Alcaligenes eutrophus 2-oxoglutarate dehydrogenase E1 component OdhA SWALL:ODO1_ALCEU (SWALL:Q59106) (950 aa) fasta scores: E(): 0, 77.39% id in 951 aa.
 
     0.561
sucB
Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 
    0.543
BPSL1905
Similar to Rhizobium loti transposase mlr9643 SWALL:Q98P22 (EMBL:AP003017) (127 aa) fasta scores: E(): 1.8e-11, 34.82% id in 112 aa, and to Agrobacterium tumefaciens hypothetical 15.7 kDa protein SWALL:Q44424 (EMBL:M55562) (137 aa) fasta scores: E(): 2e-11, 35.71% id in 112 aa.
       0.468
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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