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BPSL2003 BPSL2003 flgH flgH BPSL1913 BPSL1913 gspD gspD BPSL0294 BPSL0294 BPSL2989 BPSL2989 BPSL3105 BPSL3105 BPSS1679 BPSS1679 BPSL2002 BPSL2002 BPSL1775 BPSL1775
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL2003Similar to Sulfolobus tokodaii hypothetical protein st1080 SWALL:Q972Q3 (EMBL:AP000984) (114 aa) fasta scores: E(): 1.5e-14, 44.76% id in 105 aa, and to Thermotoga maritima hypothetical protein tm0763 SWALL:Y763_THEMA (SWALL:Q9WZM2) (106 aa) fasta scores: E(): 4.3e-13, 44.55% id in 101 aa; Belongs to the UPF0145 family. (111 aa)    
Predicted Functional Partners:
flgH
Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.629
BPSL1913
Putative exported protein; Similar to Ralstonia solanacearum putative outer membrane chanel lipoprotein rsc1294 or rs02807 SWALL:Q8XZV1 (EMBL:AL646063) (489 aa) fasta scores: E(): 1.9e-77, 48.72% id in 470 aa, and to Xanthomonas axonopodis outer membrane efflux protein YjcP or xac1444 SWALL:AAM36315 (EMBL:AE011776) (496 aa) fasta scores: E(): 6.1e-56, 38.46% id in 481 aa.
     
 0.510
gspD
Previously sequenced as Burkholderia pseudomallei general secretory pathway protein D GspD SWALL:Q9ZF86 (EMBL:AF110185) (750 aa) fasta scores: E(): 0, 99.86% id in 750 aa. CDS is extended at the N-terminus in comparison to the previously sequenced protein. Similar to Erwinia chrysanthemi general secretion pathway protein D precursor OutD SWALL:GSPD_ERWCH (SWALL:P31700) (712 aa) fasta scores: E(): 2.5e-21, 33.23% id in 680 aa.
      
 0.499
BPSL0294
Putative exported protein; C-terminal region is similar to Pseudomonas aeruginosa porin B precursor OprB SWALL:PORB_PSEAE (SWALL:Q51485) (454 aa) fasta scores: E(): 3.1e-09, 27.09% id in 465 aa, and to Ralstonia solanacearum putative porin B precursor rsp1632 or rs02190 SWALL:Q8XPK8 (EMBL:AL646086) (456 aa) fasta scores: E(): 4.4e-08, 29.29% id in 471 aa. Possible alternative translational start site.
      
 0.499
BPSL2989
Putative lipoprotein; Similar to Yersinia enterocolitica outer membrane lipoprotein precursor Pcp or PcpY SWALL:PCP_YEREN (SWALL:P31484) (155 aa) fasta scores: E(): 2.4e-12, 40.94% id in 149 aa, and to Escherichia coli, and Escherichia coli O157:H7 outer membrane lipoprotein slyb precursor SlyB or b1641 or z2655 or ecs2350 SWALL:SLYB_ECOLI (SWALL:P55741) (155 aa) fasta scores: E(): 1.3e-10, 36.87% id in 141 aa.
      
 0.499
BPSL3105
Similar to Ralstonia solanacearum hypothetical protein Rsp0745 or Rs01963 SWALL:Q8XRT6 (EMBL:AL646080) (167 aa) fasta scores: E(): 3.7e-49, 72.45% id in 167 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2367 SWALL:Q9I1B2 (EMBL:AE004663) (165 aa) fasta scores: E(): 1.1e-11, 32.91% id in 158 aa.
      
 0.497
BPSS1679
Putative porin related exported protein; Similar to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 6.7e-44, 44.33% id in 406 aa, and to Alcaligenes eutrophus hypothetical 40.6 kDa protein in gbd 3'region precursor SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 1.4e-36, 42.71% id in 391 aa.
      
 0.497
BPSL2002
Putative iron-containing alcohol dehydrogenase; Similar to Citrobacter freundii 1,3-propanediol dehydrogenase DhaT SWALL:DHAT_CITFR (SWALL:P45513) (387 aa) fasta scores: E(): 5.4e-34, 36.79% id in 375 aa, to Bacillus subtilis alcohol dehydrogenase GbsB SWALL:GBSB_BACSU (SWALL:P71017) (402 aa) fasta scores: E(): 1e-28, 33.42% id in 371 aa, and to Ralstonia solanacearum probable NAD-dependent 4-hydroxybutyrate dehydrogenase oxidoreductase protein rsc1771 or rs02958 SWALL:Q8XYI7 (EMBL:AL646066) (382 aa) fasta scores: E(): 5.7e-117, 80.89% id in 382 aa.
       0.482
BPSL1775
Putative iron uptake receptor precursor; Similar to Burkholderia cepacia ornibactin receptor precursor OrbA SWALL:Q9F480 (EMBL:AF013993) (755 aa) fasta scores: E(): 5e-203, 68.7% id in 754 aa, and to Erwinia chrysanthemi ferrichrysobactin receptor precursor Ftc SWALL:FCT_ERWCH (SWALL:Q47162) (735 aa) fasta scores: E(): 4.2e-76, 34.5% id in 713 aa.
      
 0.475
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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