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BPSL2084 BPSL2084 BPSL1135 BPSL1135 BPSS1282 BPSS1282 BPSL2047 BPSL2047 BPSL1398 BPSL1398 lipB-2 lipB-2 BPSS0564 BPSS0564 BPSS1911 BPSS1911 BPSS2053 BPSS2053 BPSL1396 BPSL1396 BPSL2901 BPSL2901
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPSL2084Putative bifunctional protein; N-terminal region similar to Bradyrhizobium sp. nodulation protein NolA SWALL:NOLA_BRASN (SWALL:P50330) (237 aa) fasta scores: E(): 1e-11, 31.78% id in 236 aa, and C-terminal region similar to Rhizobium loti hypothetical protein mlr0915 SWALL:Q98LR1 (EMBL:AP002996) (299 aa) fasta scores: E(): 6.8e-31, 41.69% id in 271 aa. Note: There is a region of approx. 100 residues in between these two regions of similarity that presents no matches to the databases entries. Possible fusion protein; Belongs to the UPF0677 family. (659 aa)    
Predicted Functional Partners:
BPSL1135
Hypothetical protein; No significant database matches.
 
     0.648
BPSS1282
Putative lipoprotein; No significant database matches.
  
     0.613
BPSL2047
Conserved hypothetical protein; Similar to the N-terminal region of Ralstonia solanacearum hypothetical protein rsp0177 or rs04689 SWALL:Q8XTD6 (EMBL:AL646077) (740 aa) fasta scores: E(): 8.9e-16, 38.02% id in 760 aa.
  
     0.605
BPSL1398
C-terminal region is similar to Pseudomonas aeruginosa probable transcriptional regulator pa3771 SWALL:Q9HXM4 (EMBL:AE004796) (325 aa) fasta scores: E(): 2.4e-19, 29.81% id in 332 aa, and to the C-terminal region to Xanthomonas axonopodis two-component system regulatory protein xac0136 SWALL:AAM35028 (EMBL:AE011636) (210 aa) fasta scores: E(): 0.011, 30.35% id in 112 aa. Possible alternative translational start site.
  
     0.582
lipB-2
Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
  
     0.570
BPSS0564
Putative thermolysin metallopeptidase; Similar to Bacillus stearothermophilus thermolysin precursor NprT SWALL:THER_BACST (SWALL:P06874) (548 aa) fasta scores: E(): 0.00076, 23.78% id in 597 aa, and to Alicyclobacillus acidocaldarius thermolysin precursor SWALL:Q43880 (EMBL:U07824) (546 aa) fasta scores: E(): 2.5e-05, 24.32% id in 592 aa.
  
     0.564
BPSS1911
Putative membrane protein; No significant database matches.
  
     0.564
BPSS2053
Putative cell surface protein; Similar to Ralstonia solanacearum probable hemagglutinin-related protein Rsc1775 or Rs04371 SWALL:Q8XYI3 (EMBL:AL646066) (3165 aa) fasta scores: E(): 3.8e-164, 33.54% id in 3258 aa, and to Yersinia pestis putative adhesin Ypo0599 or y3579 SWALL:Q8ZIA8 (EMBL:AJ414143) (3295 aa) fasta scores: E(): 3.1e-62, 30.38% id in 3383 aa.
  
     0.563
BPSL1396
Putative membrane protein; Similar to Pseudomonas aeruginosa hypothetical protein pa3773 SWALL:Q9HXM2 (EMBL:AE004796) (385 aa) fasta scores: E(): 2e-54, 49.73% id in 374 aa, and to Streptomyces coelicolor putative transmembrane efflux protein sco2545 or scc77.12 SWALL:Q9RDE6 (EMBL:AL136503) (449 aa) fasta scores: E(): 5.6e-12, 29.58% id in 382 aa.
  
     0.556
BPSL2901
Putative lipoprotein; Very low similarity to Pseudomonas aeruginosa hypothetical protein pa4384 SWALL:Q9HW18 (EMBL:AE004854) (228 aa) fasta scores: E(): 3.6e-05, 31.84% id in 157 aa.
  
     0.554
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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